Literature DB >> 8112571

Variability and evolution of highly repeated DNA sequences in the genus Beta.

T Schmidt1, J S Heslop-Harrison.   

Abstract

Satellite DNA from wild beet species was separated from restriction endonuclease digested genomic DNA by polyacrylamide gel electrophoresis. Two nonhomologous HaeIII satellite DNA repeats were cloned from the wild beet Beta trigyna. The type I repeat is 140-149 bp long and AT rich, while the type II is 162 bp in size and GC rich. A third repetitive HaeIII element cloned from the related wild beet B. corolliflora was shown to be organized as a HinfI satellite DNA family in the cultivated beet B. vulgaris ssp. vulgaris and the wild beet B. vulgaris ssp. maritima. This type III satellite monomer is 149 bp long and contains a high number of short direct subrepeats. The monomer was found in different genomic organizations and copy numbers in all sections of the genus Beta indicating an amplification early in the phylogeny. The HaeIII repeats from B. trigyna are characterized by a lower variability and form long tandem arrays in the genomes of Corollinae species. The investigation of the distribution of all three sequence families provided data that may contribute to the solution of taxonomic problems of the genus Beta and be useful in the characterization of hybrids and derived lines with alien wild beet chromosomes.

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Year:  1993        PMID: 8112571     DOI: 10.1139/g93-142

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  22 in total

1.  Microarray-based survey of repetitive genomic sequences in Vicia spp.

Authors:  M Nouzová; P Neumann; A Navrátilová; D W Galbraith; J Macas
Journal:  Plant Mol Biol       Date:  2001-01       Impact factor: 4.076

Review 2.  Comparative genome organization in plants: from sequence and markers to chromatin and chromosomes.

Authors:  J S Heslop-Harrison
Journal:  Plant Cell       Date:  2000-05       Impact factor: 11.277

3.  Molecular organization of terminal repetitive DNA in Beta species.

Authors:  Daryna Dechyeva; Thomas Schmidt
Journal:  Chromosome Res       Date:  2007-01-19       Impact factor: 5.239

4.  Selection of monosomic addition plants in offspring families using repetitive DNA probes in Beta L.

Authors:  M Mesbah; T S De Bock; J M Sandbrink; R M Klein-Lankhorst; W Lange
Journal:  Theor Appl Genet       Date:  1996-05       Impact factor: 5.699

5.  Tandem repeats of Allium fistulosum associated with major chromosomal landmarks.

Authors:  Ilya V Kirov; Anna V Kiseleva; Katrijn Van Laere; Nadine Van Roy; Ludmila I Khrustaleva
Journal:  Mol Genet Genomics       Date:  2017-02-01       Impact factor: 3.291

6.  High-resolution mapping of repetitive DNA by in situ hybridization: molecular and chromosomal features of prominent dispersed and discretely localized DNA families from the wild beet species Beta procumbens.

Authors:  T Schmidt; J S Heslop-Harrison
Journal:  Plant Mol Biol       Date:  1996-03       Impact factor: 4.076

7.  The physical and genomic organization of microsatellites in sugar beet.

Authors:  T Schmidt; J S Heslop-Harrison
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-06       Impact factor: 11.205

8.  Divergence of satellite DNA and interspersion of dispersed repeats in the genome of the wild beet Beta procumbens.

Authors:  Daryna Dechyeva; Frank Gindullis; Thomas Schmidt
Journal:  Chromosome Res       Date:  2003       Impact factor: 5.239

9.  Analysis and chromosomal localization of retrotransposons in sugar beet (Beta vulgaris L.): LINEs and Ty1-copia-like elements as major components of the genome.

Authors:  T Schmidt; S Kubis; J S Heslop-Harrison
Journal:  Chromosome Res       Date:  1995-09       Impact factor: 5.239

10.  Analysis of a c0t-1 library enables the targeted identification of minisatellite and satellite families in Beta vulgaris.

Authors:  Falk Zakrzewski; Torsten Wenke; Daniela Holtgräwe; Bernd Weisshaar; Thomas Schmidt
Journal:  BMC Plant Biol       Date:  2010-01-11       Impact factor: 4.215

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