Literature DB >> 8106367

MgATP-induced conformational changes in the iron protein from Azotobacter vinelandii, as studied by small-angle x-ray scattering.

L Chen1, N Gavini, H Tsuruta, D Eliezer, B K Burgess, S Doniach, K O Hodgson.   

Abstract

Small angle x-ray scattering experiments have been carried out on the purified iron proteins of nitrogenase from wild-type Azotobacter vinelandii and from a Nif- mutant strain, A. vinelandii UW91 (which has an A157S mutation). This study was designed to investigate the influence of MgATP and MgADP binding on the protein structure in solution. For the wild-type protein, the binding of MgATP induces a significant conformational change that is observed as a decrease of about 2.0 A in the radius of gyration. In contrast, the binding of MgADP to the wild-type iron protein does not detectably affect the radius of gyration. In the absence of nucleotides, the radius of gyration for the UW91 mutant is indistinguishable from that of the wild-type. However, unlike for the wild-type protein, the radius of gyration of the UW91 iron protein is unaffected by the addition of MgATP. We have previously shown that the UW91 iron protein has a normal [4Fe-4S] cluster and MgATP binding ability but that it is completely blocked for electron transfer and MgATP hydrolysis (Gavini, N., and Burgess, B. K. (1992) J. Biol. Chem. 267, 21179-21186). These x-ray scattering measurements suggest that a conformation different from that of the native state is therefore required for the iron protein to perform electron transfer to the MoFe protein. These results also support the hypothesis that Ala-157 is crucial for the iron protein to establish the electron-transfer-favored conformation induced by MgATP binding.

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Year:  1994        PMID: 8106367

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  12 in total

1.  Probing the MgATP-bound conformation of the nitrogenase Fe protein by solution small-angle X-ray scattering.

Authors:  Ranjana Sarma; David W Mulder; Eric Brecht; Robert K Szilagyi; Lance C Seefeldt; Hiro Tsuruta; John W Peters
Journal:  Biochemistry       Date:  2007-11-15       Impact factor: 3.162

Review 2.  Reactivity, Mechanism, and Assembly of the Alternative Nitrogenases.

Authors:  Andrew J Jasniewski; Chi Chung Lee; Markus W Ribbe; Yilin Hu
Journal:  Chem Rev       Date:  2020-03-04       Impact factor: 60.622

3.  Isolation and characterization of nitrogenase MoFe protein from the mutant strain pHK17 of Klebsiella pneumoniae in which the two bridging cysteine residues of the P-clusters are replaced by the non-coordinating amino acid alanine.

Authors:  F K Yousafzai; M Buck; B E Smith
Journal:  Biochem J       Date:  1996-08-15       Impact factor: 3.857

Review 4.  Electron Transfer in Nitrogenase.

Authors:  Hannah L Rutledge; F Akif Tezcan
Journal:  Chem Rev       Date:  2020-01-30       Impact factor: 60.622

5.  Elucidating thermodynamic parameters for electron transfer proteins using isothermal titration calorimetry: application to the nitrogenase Fe protein.

Authors:  Morten Sørlie; Jeannine M Chan; Haijang Wang; Lance C Seefeldt; Vernon D Parker
Journal:  J Biol Inorg Chem       Date:  2003-02-25       Impact factor: 3.358

Review 6.  Second and Outer Coordination Sphere Effects in Nitrogenase, Hydrogenase, Formate Dehydrogenase, and CO Dehydrogenase.

Authors:  Sven T Stripp; Benjamin R Duffus; Vincent Fourmond; Christophe Léger; Silke Leimkühler; Shun Hirota; Yilin Hu; Andrew Jasniewski; Hideaki Ogata; Markus W Ribbe
Journal:  Chem Rev       Date:  2022-07-18       Impact factor: 72.087

7.  Structural basis for coupled ATP-driven electron transfer in the double-cubane cluster protein.

Authors:  Jae-Hun Jeoung; Sabine Nicklisch; Holger Dobbek
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-29       Impact factor: 12.779

Review 8.  Nitrogenase and homologs.

Authors:  Yilin Hu; Markus W Ribbe
Journal:  J Biol Inorg Chem       Date:  2014-12-10       Impact factor: 3.358

9.  Docking of nitrogenase iron- and molybdenum-iron proteins for electron transfer and MgATP hydrolysis: the role of arginine 140 and lysine 143 of the Azotobacter vinelandii iron protein.

Authors:  L C Seefeldt
Journal:  Protein Sci       Date:  1994-11       Impact factor: 6.725

10.  Structural basis for VO2+ inhibition of nitrogenase activity (A): 31P and 23Na interactions with the metal at the nucleotide binding site of the nitrogenase Fe protein identified by ENDOR spectroscopy.

Authors:  Jan Petersen; Karl Fisher; David J Lowe
Journal:  J Biol Inorg Chem       Date:  2008-05       Impact factor: 3.358

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