Literature DB >> 8067994

The role of lysine-67 in a class C beta-lactamase is mainly electrostatic.

D Monnaie1, A Dubus, J M Frère.   

Abstract

By using site-directed mutagenesis, the conserved Lys-67 residue situated three positions after the active-site Ser of a class C beta-lactamase was replaced by Arg or Gln. The Lys-67-Gln protein was nearly inactive. Although severely impaired, the Lys-67-Arg mutant exhibited an appreciable activity above pH 7.5 and, for some poor substrates of the wild-type enzyme, the kcat. values were even increased. The properties of the Lys-67-Arg mutant were studied by both steady-state and transient-state kinetic methods with a variety of compounds representing distinct classes of available substrates. With beta-lactam substrates, the kcat./Km values reflecting the efficiency of the acylation step (k+2/K) were decreased 25-100-fold. When the individual values could be measured, k+2 was not significantly altered, but K was found to be strongly increased, a result most likely explained by a corresponding increase in the k+1/k-1 ratio. These results, combined with the much stronger impairment of the Lys-67-Gln mutant, can be interpreted by attributing an electrostatic role to the positive ammonium group of the Lys-67 side chain.

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Year:  1994        PMID: 8067994      PMCID: PMC1137182          DOI: 10.1042/bj3020001

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  18 in total

1.  Site-directed mutagenesis of the Streptomyces R61 DD-peptidase. Catalytic function of the conserved residues around the active site and a comparison with class-A and class-C beta-lactamases.

Authors:  A M Hadonou; J M Wilkin; L Varetto; B Joris; J Lamotte-Brasseur; D Klein; C Duez; J M Ghuysen; J M Frère
Journal:  Eur J Biochem       Date:  1992-07-01

2.  A rapid-kinetic study of the class C beta-lactamase of Enterobacter cloacae 908R.

Authors:  D Monnaie; R Virden; J M Frère
Journal:  FEBS Lett       Date:  1992-07-20       Impact factor: 4.124

3.  The mutation Lys234His yields a class A beta-lactamase with a novel pH-dependence.

Authors:  J Brannigan; A Matagne; F Jacob; C Damblon; B Joris; D Klein; B G Spratt; J M Frère
Journal:  Biochem J       Date:  1991-09-15       Impact factor: 3.857

4.  Refined crystal structure of beta-lactamase from Citrobacter freundii indicates a mechanism for beta-lactam hydrolysis.

Authors:  C Oefner; A D'Arcy; J J Daly; K Gubernator; R L Charnas; I Heinze; C Hubschwerlen; F K Winkler
Journal:  Nature       Date:  1990-01-18       Impact factor: 49.962

5.  A dramatic change in the rate-limiting step of beta-lactam hydrolysis results from the substitution of the active-site serine residue by a cysteine in the class-C beta-lactamase of Enterobacter cloacae 908R.

Authors:  A Dubus; D Monnaie; C Jacobs; S Normark; J M Frère
Journal:  Biochem J       Date:  1993-06-01       Impact factor: 3.857

6.  Interactions between active-site-serine beta-lactamases and compounds bearing a methoxy side chain on the alpha-face of the beta-lactam ring: kinetic and molecular modelling studies.

Authors:  A Matagne; J Lamotte-Brasseur; G Dive; J R Knox; J M Frère
Journal:  Biochem J       Date:  1993-08-01       Impact factor: 3.857

7.  A survey of the kinetic parameters of class C beta-lactamases. Cephalosporins and other beta-lactam compounds.

Authors:  M Galleni; G Amicosante; J M Frère
Journal:  Biochem J       Date:  1988-10-01       Impact factor: 3.857

8.  Mechanism of acyl transfer by the class A serine beta-lactamase of Streptomyces albus G.

Authors:  J Lamotte-Brasseur; G Dive; O Dideberg; P Charlier; J M Frère; J M Ghuysen
Journal:  Biochem J       Date:  1991-10-01       Impact factor: 3.857

9.  Site-directed mutagenesis of beta-lactamase I. Single and double mutants of Glu-166 and Lys-73.

Authors:  R M Gibson; H Christensen; S G Waley
Journal:  Biochem J       Date:  1990-12-15       Impact factor: 3.857

10.  Molecular structure of the acyl-enzyme intermediate in beta-lactam hydrolysis at 1.7 A resolution.

Authors:  N C Strynadka; H Adachi; S E Jensen; K Johns; A Sielecki; C Betzel; K Sutoh; M N James
Journal:  Nature       Date:  1992-10-22       Impact factor: 49.962

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  11 in total

1.  Identification of residues critical for catalysis in a class C beta-lactamase by combinatorial scanning mutagenesis.

Authors:  Shalom D Goldberg; William Iannuccilli; Tuan Nguyen; Jingyue Ju; Virginia W Cornish
Journal:  Protein Sci       Date:  2003-08       Impact factor: 6.725

2.  Saturation mutagenesis of Asn152 reveals a substrate selectivity switch in P99 cephalosporinase.

Authors:  Scott T Lefurgy; René M de Jong; Virginia W Cornish
Journal:  Protein Sci       Date:  2007-12       Impact factor: 6.725

3.  The deacylation mechanism of AmpC beta-lactamase at ultrahigh resolution.

Authors:  Yu Chen; George Minasov; Tomer A Roth; Fabio Prati; Brian K Shoichet
Journal:  J Am Chem Soc       Date:  2006-03-08       Impact factor: 15.419

4.  Investigation of the acylation mechanism of class C beta-lactamase: pKa calculation, molecular dynamics simulation and quantum mechanical calculation.

Authors:  Smriti Sharma; Pradipta Bandyopadhyay
Journal:  J Mol Model       Date:  2011-05-04       Impact factor: 1.810

5.  pKa measurements from nuclear magnetic resonance of tyrosine-150 in class C beta-lactamase.

Authors:  Yoko Kato-Toma; Takashi Iwashita; Katsuyoshi Masuda; Yoshiaki Oyama; Masaji Ishiguro
Journal:  Biochem J       Date:  2003-04-01       Impact factor: 3.857

Review 6.  Three decades of beta-lactamase inhibitors.

Authors:  Sarah M Drawz; Robert A Bonomo
Journal:  Clin Microbiol Rev       Date:  2010-01       Impact factor: 26.132

7.  Structure of AmpC beta-lactamase (AmpCD) from an Escherichia coli clinical isolate with a tripeptide deletion (Gly286-Ser287-Asp288) in the H10 helix.

Authors:  Yoshihiro Yamaguchi; Genta Sato; Yuriko Yamagata; Yohei Doi; Jun-ichi Wachino; Yoshichika Arakawa; Koki Matsuda; Hiromasa Kurosaki
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-05-22

8.  Reclaiming the efficacy of β-lactam-β-lactamase inhibitor combinations: avibactam restores the susceptibility of CMY-2-producing Escherichia coli to ceftazidime.

Authors:  Krisztina M Papp-Wallace; Marisa L Winkler; Julian A Gatta; Magdalena A Taracila; Sujatha Chilakala; Yan Xu; J Kristie Johnson; Robert A Bonomo
Journal:  Antimicrob Agents Chemother       Date:  2014-05-12       Impact factor: 5.191

9.  Re-examining the role of Lys67 in class C beta-lactamase catalysis.

Authors:  Yu Chen; Andrea McReynolds; Brian K Shoichet
Journal:  Protein Sci       Date:  2009-03       Impact factor: 6.725

10.  Flexibility Correlation between Active Site Regions Is Conserved across Four AmpC β-Lactamase Enzymes.

Authors:  Jenna R Brown; Dennis R Livesay
Journal:  PLoS One       Date:  2015-05-27       Impact factor: 3.240

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