Literature DB >> 8055466

DNA fingerprinting of medically important microorganisms by use of PCR.

A van Belkum1.   

Abstract

Selected segments of any DNA molecule can be amplified exponentially by PCR. This technique provides a powerful tool to detect and identify minimal numbers of microorganisms. PCR is applicable both in diagnosis and in epidemiology. By amplification of hypervariable DNA domains, differences can be detected even among closely related strains. PCR fingerprinting is a valuable tool for medical microbiologists, epidemiologists, and microbial taxonomists. The current state of PCR-mediated genotyping is reviewed, and a comparison with conventional molecular typing methods is included. Because of its speed and versatility, PCR fingerprinting will play an important role in microbial genetics, epidemiology, and systematics.

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Year:  1994        PMID: 8055466      PMCID: PMC358316          DOI: 10.1128/CMR.7.2.174

Source DB:  PubMed          Journal:  Clin Microbiol Rev        ISSN: 0893-8512            Impact factor:   26.132


  111 in total

1.  Setting standards for the use of DNA-typing results in the courtroom--the state of the art.

Authors:  G J Annas
Journal:  N Engl J Med       Date:  1992-06-11       Impact factor: 91.245

2.  NASBA isothermal enzymatic in vitro nucleic acid amplification optimized for the diagnosis of HIV-1 infection.

Authors:  T Kievits; B van Gemen; D van Strijp; R Schukkink; M Dircks; H Adriaanse; L Malek; R Sooknanan; P Lens
Journal:  J Virol Methods       Date:  1991-12       Impact factor: 2.014

Review 3.  The utility of DNA typing in forensic work.

Authors:  R Chakraborty; K K Kidd
Journal:  Science       Date:  1991-12-20       Impact factor: 47.728

4.  Rapid, simple method for treating clinical specimens containing Mycobacterium tuberculosis to remove DNA for polymerase chain reaction.

Authors:  G E Buck; L C O'Hara; J T Summersgill
Journal:  J Clin Microbiol       Date:  1992-05       Impact factor: 5.948

5.  Subtyping of Streptococcus uberis by DNA amplification fingerprinting.

Authors:  B M Jayarao; B J Bassam; G Caetano-Anollés; P M Gresshoff; S P Oliver
Journal:  J Clin Microbiol       Date:  1992-05       Impact factor: 5.948

Review 6.  Epidemiological typing methods for mycoses.

Authors:  M A Pfaller
Journal:  Clin Infect Dis       Date:  1992-03       Impact factor: 9.079

7.  Genotypic and phenotypic methods for the investigation of a nosocomial Legionella pneumophila outbreak and efficacy of control measures.

Authors:  M J Struelens; N Maes; F Rost; A Deplano; F Jacobs; C Liesnard; N Bornstein; F Grimont; S Lauwers; M P McIntyre
Journal:  J Infect Dis       Date:  1992-07       Impact factor: 5.226

8.  Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes.

Authors:  J Versalovic; T Koeuth; J R Lupski
Journal:  Nucleic Acids Res       Date:  1991-12-25       Impact factor: 16.971

9.  Differentiation of Fusarium solani f. sp. cucurbitae races 1 and 2 by random amplification of polymorphic DNA.

Authors:  R N Crowhurst; B T Hawthorne; E H Rikkerink; M D Templeton
Journal:  Curr Genet       Date:  1991-11       Impact factor: 3.886

10.  Chromosome translocation in Plasmodium berghei.

Authors:  C J Janse; J Ramesar; B Mons
Journal:  Nucleic Acids Res       Date:  1992-02-11       Impact factor: 16.971

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  58 in total

1.  PCR-Based methods for genotyping viridans group streptococci.

Authors:  S Alam; S R Brailsford; R A Whiley; D Beighton
Journal:  J Clin Microbiol       Date:  1999-09       Impact factor: 5.948

Review 2.  Amplified-fragment length polymorphism analysis: the state of an art.

Authors:  P H Savelkoul; H J Aarts; J de Haas; L Dijkshoorn; B Duim; M Otsen; J L Rademaker; L Schouls; J A Lenstra
Journal:  J Clin Microbiol       Date:  1999-10       Impact factor: 5.948

3.  Suitability of PCR fingerprinting, infrequent-restriction-site PCR, and pulsed-field gel electrophoresis, combined with computerized gel analysis, in library typing of Salmonella enterica serovar enteritidis.

Authors:  J Garaizar; N López-Molina; I Laconcha; D Lau Baggesen; A Rementeria; A Vivanco; A Audicana; I Perales
Journal:  Appl Environ Microbiol       Date:  2000-12       Impact factor: 4.792

Review 4.  Nasal carriage of Staphylococcus aureus: epidemiology, underlying mechanisms, and associated risks.

Authors:  J Kluytmans; A van Belkum; H Verbrugh
Journal:  Clin Microbiol Rev       Date:  1997-07       Impact factor: 26.132

Review 5.  Whipple's disease and "Tropheryma whippelii".

Authors:  F Dutly; M Altwegg
Journal:  Clin Microbiol Rev       Date:  2001-07       Impact factor: 26.132

6.  High-resolution melting-curve analysis of ligation-mediated real-time PCR for rapid evaluation of an epidemiological outbreak of extended-spectrum-beta-lactamase-producing Escherichia coli.

Authors:  Hanna Woksepp; Cecilia Jernberg; Maria Tärnberg; Anna Ryberg; Alma Brolund; Michaela Nordvall; Barbro Olsson-Liljequist; Karin Tegmark Wisell; Hans-Jürg Monstein; Lennart E Nilsson; Thomas Schön
Journal:  J Clin Microbiol       Date:  2011-09-28       Impact factor: 5.948

Review 7.  Short-sequence DNA repeats in prokaryotic genomes.

Authors:  A van Belkum; S Scherer; L van Alphen; H Verbrugh
Journal:  Microbiol Mol Biol Rev       Date:  1998-06       Impact factor: 11.056

8.  Characterization of verocytotoxin-producing Escherichia coli O157 isolates from patients with haemolytic uraemic syndrome in Western Europe.

Authors:  A E Heuvelink; N C van de Kar; J F Meis; L A Monnens; W J Melchers
Journal:  Epidemiol Infect       Date:  1995-08       Impact factor: 2.451

9.  Risk of cross-colonization and infection by Pseudomonas aeruginosa in a holiday camp for cystic fibrosis patients.

Authors:  J A Hoogkamp-Korstanje; J F Meis; J Kissing; J van der Laag; W J Melchers
Journal:  J Clin Microbiol       Date:  1995-03       Impact factor: 5.948

10.  Comparative assessment of genotyping methods for epidemiologic study of Burkholderia cepacia genomovar III.

Authors:  Tom Coenye; Theodore Spilker; Alissa Martin; John J LiPuma
Journal:  J Clin Microbiol       Date:  2002-09       Impact factor: 5.948

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