Literature DB >> 8052849

On the probability of finding a water molecule in a nonpolar cavity.

R Wolfenden1, A Radzicka.   

Abstract

Measurements of solubility and vapor pressure indicate that the cost of making a cavity in a nonpolar solvent that is large enough to accommodate a single water molecule is just balanced by the attraction between the water molecule and the walls of the cavity. As a result of this unexpected coincidence, the equilibrium constant for entry of an isolated water molecule from the vapor phase into cyclohexane is almost exactly unity at room temperature. Molecules smaller than water prefer the vapor phase, whereas molecules larger than water prefer cyclohexane. In equilibrium with liquid water, the tendency of single water molecules to enter small nonpolar cavities, such as may be present in mutant proteins, is expected to be vanishingly small.

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Year:  1994        PMID: 8052849     DOI: 10.1126/science.8052849

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  27 in total

1.  Direct determination of hydration in the interdigitated and ripple phases of dihexadecylphosphatidylcholine: hydration of a hydrophobic cavity at the membrane/water interface.

Authors:  S Channareddy; N Janes
Journal:  Biophys J       Date:  1999-10       Impact factor: 4.033

2.  Magnetization transfer from laser-polarized xenon to protons located in the hydrophobic cavity of the wheat nonspecific lipid transfer protein.

Authors:  C Landon; P Berthault; F Vovelle; H Desvaux
Journal:  Protein Sci       Date:  2001-04       Impact factor: 6.725

3.  Structural and thermodynamic analysis of the binding of solvent at internal sites in T4 lysozyme.

Authors:  J Xu; W A Baase; M L Quillin; E P Baldwin; B W Matthews
Journal:  Protein Sci       Date:  2001-05       Impact factor: 6.725

4.  Energetics of aliphatic deletions in protein cores.

Authors:  Marta Bueno; Luis A Campos; Jorge Estrada; Javier Sancho
Journal:  Protein Sci       Date:  2006-08       Impact factor: 6.725

Review 5.  A review about nothing: are apolar cavities in proteins really empty?

Authors:  Brian W Matthews; Lijun Liu
Journal:  Protein Sci       Date:  2009-03       Impact factor: 6.725

6.  Determination of solvent content in cavities in IL-1beta using experimentally phased electron density.

Authors:  Michael L Quillin; Paul T Wingfield; Brian W Matthews
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-18       Impact factor: 11.205

7.  Use of experimental crystallographic phases to examine the hydration of polar and nonpolar cavities in T4 lysozyme.

Authors:  Lijun Liu; Michael L Quillin; Brian W Matthews
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-09       Impact factor: 11.205

8.  Water clusters in nonpolar cavities.

Authors:  Subramanian Vaitheeswaran; Hao Yin; Jayendran C Rasaiah; Gerhard Hummer
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-30       Impact factor: 11.205

9.  A topologically conserved aliphatic residue in alpha-helix 6 stabilizes the hydrophobic core in domain II of glutathione transferases and is a structural determinant for the unfolding pathway.

Authors:  L A Wallace; G L Blatch; H W Dirr
Journal:  Biochem J       Date:  1998-12-01       Impact factor: 3.857

10.  A catalytic function for the structurally conserved residue Phe 100 of ribonuclease T1.

Authors:  J Doumen; M Gonciarz; I Zegers; R Loris; L Wyns; J Steyaert
Journal:  Protein Sci       Date:  1996-08       Impact factor: 6.725

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