Literature DB >> 8045909

Degradation of rRNA in Salmonella strains: a novel mechanism to regulate the concentrations of rRNA and ribosomes.

D Hsu1, L M Shih, Y C Zee.   

Abstract

We have previously shown that the 23S rRNA of Salmonella strains is highly fragmented by specific enzyme cleavages. In this article, we report that 23S rRNA of Salmonella strains is rapidly degraded as the cells enter the stationary phase. More than 90% of the 23S rRNA is degraded when the cells reach the stationary phase. The rate of degradation of 23S rRNA correlated with its degree of fragmentation. This degradation is probably mediated by newly synthesized protein factor(s), since treatment with chloramphenicol or rifampin inhibits the rRNA degradation. We propose that degradation of 23S rRNA is a novel mechanism in the regulation of the bacterial 23S rRNA and ribosome concentration and that this additional regulatory mechanism provides some selective advantage to cells.

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Year:  1994        PMID: 8045909      PMCID: PMC196301          DOI: 10.1128/jb.176.15.4761-4765.1994

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  17 in total

Review 1.  The role of the 'gearbox' in the transcription of essential genes.

Authors:  M Vicente; S R Kushner; T Garrido; M Aldea
Journal:  Mol Microbiol       Date:  1991-09       Impact factor: 3.501

Review 2.  Ribosomal genes in Escherichia coli.

Authors:  L Lindahl; J M Zengel
Journal:  Annu Rev Genet       Date:  1986       Impact factor: 16.830

3.  Regulation of ribosome production in Escherichia coli: synthesis and stability of ribosomal RNA and of ribosomal protein messenger RNA at different growth rates.

Authors:  K Gausing
Journal:  J Mol Biol       Date:  1977-09-25       Impact factor: 5.469

4.  In vivo stability, maturation and relative differential synthesis rates of individual ribosomal proteins in Escherichia coli B/r.

Authors:  P P Dennis
Journal:  J Mol Biol       Date:  1974-09-05       Impact factor: 5.469

Review 5.  Regulation of the synthesis of ribosomes and ribosomal components.

Authors:  M Nomura; R Gourse; G Baughman
Journal:  Annu Rev Biochem       Date:  1984       Impact factor: 23.643

Review 6.  Components of bacterial ribosomes.

Authors:  H G Wittmann
Journal:  Annu Rev Biochem       Date:  1982       Impact factor: 23.643

Review 7.  Translational initiation in prokaryotes.

Authors:  L Gold; D Pribnow; T Schneider; S Shinedling; B S Singer; G Stormo
Journal:  Annu Rev Microbiol       Date:  1981       Impact factor: 15.500

8.  Ribosomes exist in large excess over the apparent demand for protein synthesis during carbon starvation in marine Vibrio sp. strain CCUG 15956.

Authors:  K Flärdh; P S Cohen; S Kjelleberg
Journal:  J Bacteriol       Date:  1992-11       Impact factor: 3.490

9.  Analysis of sequence elements important for the synthesis and control of ribosomal RNA in E coli.

Authors:  M Zacharias; G Theissen; C Bradaczek; R Wagner
Journal:  Biochimie       Date:  1991-06       Impact factor: 4.079

10.  The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites.

Authors:  J Shine; L Dalgarno
Journal:  Proc Natl Acad Sci U S A       Date:  1974-04       Impact factor: 11.205

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  29 in total

1.  Combined microautoradiography-16S rRNA probe technique for determination of radioisotope uptake by specific microbial cell types in situ.

Authors:  C C Ouverney; J A Fuhrman
Journal:  Appl Environ Microbiol       Date:  1999-04       Impact factor: 4.792

2.  Use of DNA and peptide nucleic acid molecular beacons for detection and quantification of rRNA in solution and in whole cells.

Authors:  Chuanwu Xi; Michal Balberg; Stephen A Boppart; Lutgarde Raskin
Journal:  Appl Environ Microbiol       Date:  2003-09       Impact factor: 4.792

3.  Ribosome degradation in growing bacteria.

Authors:  Kerli Piir; Anton Paier; Aivar Liiv; Tanel Tenson; Ulo Maiväli
Journal:  EMBO Rep       Date:  2011-04-01       Impact factor: 8.807

4.  Fragmentation of 23S rRNA in strains of Proteus and Providencia results from intervening sequences in the rrn (rRNA) genes.

Authors:  W L Miller; K Pabbaraju; K E Sanderson
Journal:  J Bacteriol       Date:  2000-02       Impact factor: 3.490

5.  rRNA operon copy number reflects ecological strategies of bacteria.

Authors:  J A Klappenbach; J M Dunbar; T M Schmidt
Journal:  Appl Environ Microbiol       Date:  2000-04       Impact factor: 4.792

6.  Distribution of intervening sequences in the genes for 23S rRNA and rRNA fragmentation among strains of the Salmonella reference collection B (SARB) and SARC sets.

Authors:  K Pabbaraju; W L Miller; K E Sanderson
Journal:  J Bacteriol       Date:  2000-04       Impact factor: 3.490

7.  Increase in Fluorescence Intensity of 16S rRNA In Situ Hybridization in Natural Samples Treated with Chloramphenicol.

Authors:  C C Ouverney; J A Fuhrman
Journal:  Appl Environ Microbiol       Date:  1997-07       Impact factor: 4.792

8.  Molecular characterization of intervening sequences in 23S rRNA genes and 23S rRNA fragmentation in Taylorella equigenitalis.

Authors:  A Tazumi; T Sekizuka; J E Moore; B C Millar; I Taneike; M Matsuda
Journal:  Folia Microbiol (Praha)       Date:  2009-04-18       Impact factor: 2.099

9.  Brucella microti: the genome sequence of an emerging pathogen.

Authors:  Stéphane Audic; Magali Lescot; Jean-Michel Claverie; Holger C Scholz
Journal:  BMC Genomics       Date:  2009-08-04       Impact factor: 3.969

10.  Identification and characterization of intervening sequences within 23S rRNA genes from more than 200 Campylobacter isolates from seven species including atypical campylobacters.

Authors:  Akihiro Tazumi; Yuki Kakinuma; Naoaki Misawa; John E Moore; Beverley C Millar; Motoo Matsuda
Journal:  BMC Microbiol       Date:  2009-12-11       Impact factor: 3.605

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