Literature DB >> 8041793

The ORD1 gene encodes a transcription factor involved in oxygen regulation and is identical to IXR1, a gene that confers cisplatin sensitivity to Saccharomyces cerevisiae.

J R Lambert1, V W Bilanchone, M G Cumsky.   

Abstract

The yeast COX5a and COX5b genes encode isoforms of subunit Va of the mitochondrial inner membrane protein complex cytochrome c oxidase. These genes have been shown to be inversely regulated at the level of transcription by oxygen, which functions through the metabolic coeffector heme. In earlier studies we identified several regulatory elements that control transcriptional activation and aerobic repression of one of these genes, COX5b. Here, we report the isolation of trans-acting mutants that are defective in the aerobic repression of COX5b transcription. The mutants fall into two complementation groups. One group specifies ROX1, which encodes a product reported to be involved in transcriptional repression. The other group identified the gene we have designated ORD1. Mutations in ORD1 cause overexpression of COX5b aerobically but do not affect the expression of the hypoxic genes CYC7, HEM13, and ANB1. ORD1 mutations also do not affect the expression of the aerobic genes COX5a, CYC1, ROX1, ROX3, and TIF51A. The yeast genome contains a single ORD1 gene that resides on chromosome XI. Strains carrying chromosomal deletions of the ORD1 locus are viable and exhibit phenotypes similar to, but less severe than, that of the original mutant. The nucleotide sequence of ORD1 revealed that it is identical to IXR1, a yeast gene whose product contains two high mobility group boxes, binds to platinated DNA, and confers sensitivity to the antitumor drug cisplatin. Consistent with the latter observations, we found that the ORD1 product could bind to both the upstream region of COX5b and to DNA modified with cisplatin.

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Year:  1994        PMID: 8041793      PMCID: PMC44396          DOI: 10.1073/pnas.91.15.7345

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

1.  A hypoxic consensus operator and a constitutive activation region regulate the ANB1 gene of Saccharomyces cerevisiae.

Authors:  C V Lowry; M E Cerdán; R S Zitomer
Journal:  Mol Cell Biol       Date:  1990-11       Impact factor: 4.272

2.  Structural analysis of two genes encoding divergent forms of yeast cytochrome c oxidase subunit V.

Authors:  M G Cumsky; C E Trueblood; C Ko; R O Poyton
Journal:  Mol Cell Biol       Date:  1987-10       Impact factor: 4.272

3.  Synergistic activation by the glutamine-rich domains of human transcription factor Sp1.

Authors:  A J Courey; D A Holtzman; S P Jackson; R Tjian
Journal:  Cell       Date:  1989-12-01       Impact factor: 41.582

Review 4.  HMG domain proteins: architectural elements in the assembly of nucleoprotein structures.

Authors:  R Grosschedl; K Giese; J Pagel
Journal:  Trends Genet       Date:  1994-03       Impact factor: 11.639

5.  A Saccharomyces cerevisiae genomic plasmid bank based on a centromere-containing shuttle vector.

Authors:  M D Rose; P Novick; J H Thomas; D Botstein; G R Fink
Journal:  Gene       Date:  1987       Impact factor: 3.688

6.  Two nonidentical forms of subunit V are functional in yeast cytochrome c oxidase.

Authors:  M G Cumsky; C Ko; C E Trueblood; R O Poyton
Journal:  Proc Natl Acad Sci U S A       Date:  1985-04       Impact factor: 11.205

7.  Differential regulation of the two genes encoding Saccharomyces cerevisiae cytochrome c oxidase subunit V by heme and the HAP2 and REO1 genes.

Authors:  C E Trueblood; R M Wright; R O Poyton
Journal:  Mol Cell Biol       Date:  1988-10       Impact factor: 4.272

8.  Upstream activation and repression elements control transcription of the yeast COX5b gene.

Authors:  M R Hodge; K Singh; M G Cumsky
Journal:  Mol Cell Biol       Date:  1990-10       Impact factor: 4.272

9.  Inverse regulation of the yeast COX5 genes by oxygen and heme.

Authors:  M R Hodge; G Kim; K Singh; M G Cumsky
Journal:  Mol Cell Biol       Date:  1989-05       Impact factor: 4.272

10.  Identification of REO1, a gene involved in negative regulation of COX5b and ANB1 in aerobically grown Saccharomyces cerevisiae.

Authors:  C E Trueblood; R O Poyton
Journal:  Genetics       Date:  1988-11       Impact factor: 4.562

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  10 in total

1.  Spt16-Pob3 and the HMG protein Nhp6 combine to form the nucleosome-binding factor SPN.

Authors:  T Formosa; P Eriksson; J Wittmeyer; J Ginn; Y Yu; D J Stillman
Journal:  EMBO J       Date:  2001-07-02       Impact factor: 11.598

2.  Transcriptional regulation of yeast oxidative phosphorylation hypoxic genes by oxidative stress.

Authors:  Jingjing Liu; Antoni Barrientos
Journal:  Antioxid Redox Signal       Date:  2012-08-06       Impact factor: 8.401

Review 3.  Redox and reactive oxygen species regulation of mitochondrial cytochrome C oxidase biogenesis.

Authors:  Myriam Bourens; Flavia Fontanesi; Iliana C Soto; Jingjing Liu; Antoni Barrientos
Journal:  Antioxid Redox Signal       Date:  2012-10-15       Impact factor: 8.401

Review 4.  Suppression mechanisms of COX assembly defects in yeast and human: insights into the COX assembly process.

Authors:  Antoni Barrientos; Karine Gouget; Darryl Horn; Ileana C Soto; Flavia Fontanesi
Journal:  Biochim Biophys Acta       Date:  2008-05-15

5.  Ixr1 is required for the expression of the ribonucleotide reductase Rnr1 and maintenance of dNTP pools.

Authors:  Olga Tsaponina; Emad Barsoum; Stefan U Aström; Andrei Chabes
Journal:  PLoS Genet       Date:  2011-05-05       Impact factor: 5.917

6.  Ixr1 Regulates Ribosomal Gene Transcription and Yeast Response to Cisplatin.

Authors:  Ángel Vizoso-Vázquez; Mónica Lamas-Maceiras; M Isabel González-Siso; M Esperanza Cerdán
Journal:  Sci Rep       Date:  2018-02-15       Impact factor: 4.379

7.  The RNA-binding protein Puf5 and the HMGB protein Ixr1 contribute to cell cycle progression through the regulation of cell cycle-specific expression of CLB1 in Saccharomyces cerevisiae.

Authors:  Megumi Sato; Kaoru Irie; Yasuyuki Suda; Tomoaki Mizuno; Kenji Irie
Journal:  PLoS Genet       Date:  2022-07-29       Impact factor: 6.020

8.  A network of HMG-box transcription factors regulates sexual cycle in the fungus Podospora anserina.

Authors:  Jinane Ait Benkhali; Evelyne Coppin; Sylvain Brun; Leonardo Peraza-Reyes; Tom Martin; Christina Dixelius; Noureddine Lazar; Herman van Tilbeurgh; Robert Debuchy
Journal:  PLoS Genet       Date:  2013-07-18       Impact factor: 5.917

9.  Histone H3 and TORC1 prevent organelle dysfunction and cell death by promoting nuclear retention of HMGB proteins.

Authors:  Hongfeng Chen; Jason J Workman; Brian D Strahl; R Nicholas Laribee
Journal:  Epigenetics Chromatin       Date:  2016-08-17       Impact factor: 4.954

10.  The HMGB Protein KlIxr1, a DNA Binding Regulator of Kluyveromyces lactis Gene Expression Involved in Oxidative Metabolism, Growth, and dNTP Synthesis.

Authors:  Agustín Rico-Díaz; Aída Barreiro-Alonso; Cora Rey-Souto; Manuel Becerra; Mónica Lamas-Maceiras; M Esperanza Cerdán; Ángel Vizoso-Vázquez
Journal:  Biomolecules       Date:  2021-09-21
  10 in total

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