Literature DB >> 8031404

A rosy future for heterochromatin.

K R Cook1, G H Karpen.   

Abstract

The demonstration by Zhang and Spradling (1) of efficient P element transposition into heterochromatic regions will aid ongoing studies of heterochromatin structure and function. P element insertions will provide entry points for further molecular analysis of heterochromatin and will allow the isolation of small and large heterochromatic deficiencies. The generation of heterochromatic P insertions also will aid the study of heterochromatic genes. Of the heterochromatic insertions isolated by Zhang and Spradling, five were homozygous lethal, and one of these defined a lethal locus not previously uncovered by heterochromatic deficiencies. P elements have previously been used to mutagenize and clone specific heterochromatic genes (14, 19, 26). New methods, like those described here (1, 32), should allow the efficient identification and molecular isolation of other single-copy heterochromatic genes. Furthermore, since position-effect suppression allowed the recovery of heterochromatic P insertions, it may also allow the recovery of insertions in euchromatic regions previously refractory to P mutagenesis. Studies of position-effect variegation show that genes normally found in heterochromatin require a heterochromatic context for normal expression and that heterochromatin is inhibitory to euchromatic gene expression (16). The physical basis of these related phenomena--chromatin assembly, nuclear positioning, and/or heterochromatin elimination--can be resolved only with a more thorough understanding of heterochromatin structure and functions. Analyzing heterochromatin also will help define the chromosomal components responsible for inheritance processes such as chromosome pairing, sister chromatid adhesion, and centromere function. These efforts will be facilitated by the effective use of P elements combined with other current molecular-genetic approaches.

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Year:  1994        PMID: 8031404      PMCID: PMC43965          DOI: 10.1073/pnas.91.12.5219

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

Review 1.  Functional elements in Drosophila melanogaster heterochromatin.

Authors:  M Gatti; S Pimpinelli
Journal:  Annu Rev Genet       Date:  1992       Impact factor: 16.830

Review 2.  Segregation distorters.

Authors:  T W Lyttle
Journal:  Annu Rev Genet       Date:  1991       Impact factor: 16.830

3.  A position-effect assay for boundaries of higher order chromosomal domains.

Authors:  R Kellum; P Schedl
Journal:  Cell       Date:  1991-03-08       Impact factor: 41.582

4.  The organization and expression of the light gene, a heterochromatic gene of Drosophila melanogaster.

Authors:  R H Devlin; B Bingham; B T Wakimoto
Journal:  Genetics       Date:  1990-05       Impact factor: 4.562

5.  Preferential insertion of P elements into genes expressed in the germ-line of Drosophila melanogaster.

Authors:  M Bownes
Journal:  Mol Gen Genet       Date:  1990-07

6.  Cloning and characterization of the segment polarity gene cubitus interruptus Dominant of Drosophila.

Authors:  T V Orenic; D C Slusarski; K L Kroll; R A Holmgren
Journal:  Genes Dev       Date:  1990-06       Impact factor: 11.361

7.  Evidence that intergenic spacer repeats of Drosophila melanogaster rRNA genes function as X-Y pairing sites in male meiosis, and a general model for achiasmatic pairing.

Authors:  B D McKee; L Habera; J A Vrana
Journal:  Genetics       Date:  1992-10       Impact factor: 4.562

8.  The role of heterochromatin in the expression of a heterochromatic gene, the rolled locus of Drosophila melanogaster.

Authors:  D F Eberl; B J Duyf; A J Hilliker
Journal:  Genetics       Date:  1993-05       Impact factor: 4.562

9.  Reduced DNA polytenization of a minichromosome region undergoing position-effect variegation in Drosophila.

Authors:  G H Karpen; A C Spradling
Journal:  Cell       Date:  1990-10-05       Impact factor: 41.582

10.  Analysis of subtelomeric heterochromatin in the Drosophila minichromosome Dp1187 by single P element insertional mutagenesis.

Authors:  G H Karpen; A C Spradling
Journal:  Genetics       Date:  1992-11       Impact factor: 4.562

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  9 in total

1.  SopB protein-mediated silencing of genes linked to the sopC locus of Escherichia coli F plasmid.

Authors:  A S Lynch; J C Wang
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-14       Impact factor: 11.205

2.  Breakpoints in alpha, beta, and satellite III DNA sequences of chromosome 9 result in a variety of pericentric inversions.

Authors:  K H Ramesh; R S Verma
Journal:  J Med Genet       Date:  1996-05       Impact factor: 6.318

3.  Human fibroblast commitment to a senescence-like state in response to histone deacetylase inhibitors is cell cycle dependent.

Authors:  V V Ogryzko; T H Hirai; V R Russanova; D A Barbie; B H Howard
Journal:  Mol Cell Biol       Date:  1996-09       Impact factor: 4.272

Review 4.  The role of constrained self-organization in genome structural evolution.

Authors:  R von Sternberg
Journal:  Acta Biotheor       Date:  1996-06       Impact factor: 1.774

5.  Islands of complex DNA are widespread in Drosophila centric heterochromatin.

Authors:  M H Le; D Duricka; G H Karpen
Journal:  Genetics       Date:  1995-09       Impact factor: 4.562

6.  Localization of centromere function in a Drosophila minichromosome.

Authors:  T D Murphy; G H Karpen
Journal:  Cell       Date:  1995-08-25       Impact factor: 41.582

7.  Carcinogenic nickel silences gene expression by chromatin condensation and DNA methylation: a new model for epigenetic carcinogens.

Authors:  Y W Lee; C B Klein; B Kargacin; K Salnikow; J Kitahara; K Dowjat; A Zhitkovich; N T Christie; M Costa
Journal:  Mol Cell Biol       Date:  1995-05       Impact factor: 4.272

8.  A physical map of the papaya genome with integrated genetic map and genome sequence.

Authors:  Qingyi Yu; Eric Tong; Rachel L Skelton; John E Bowers; Meghan R Jones; Jan E Murray; Shaobin Hou; Peizhu Guan; Ricelle A Acob; Ming-Cheng Luo; Paul H Moore; Maqsudul Alam; Andrew H Paterson; Ray Ming
Journal:  BMC Genomics       Date:  2009-08-07       Impact factor: 3.969

9.  The Drosophila heterochromatic gene encoding poly(ADP-ribose) polymerase (PARP) is required to modulate chromatin structure during development.

Authors:  Alexei Tulin; Dianne Stewart; Allan C Spradling
Journal:  Genes Dev       Date:  2002-08-15       Impact factor: 11.361

  9 in total

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