Literature DB >> 8026214

Dissociation of enzyme oligomers: a mechanism for allosteric regulation.

T W Traut1.   

Abstract

Most enzymes exist as oligomers or polymers, and a significant subset of these (perhaps 15% of all enzymes) can reversibly dissociate and reassociate in response to an effector ligand. Such a change in subunit assembly usually is accompanied by a change in enzyme activity, providing a mechanism for regulation. Two models are described for a physical mechanism, leading to a change in activity: (1) catalytic activity depends on subunit conformation, which is modulated by subunit dissociation; and (2) catalytic or regulatory sites are located at subunit interfaces and are disrupted by subunit dissociation. Examples of such enzymes show that both catalytic sites and regulatory sites occur at the junction of 2 subunits. In addition, for 9 enzymes, kinetic studies supported the existence of a separate regulatory site with significantly different affinity for the binding of either a substrate or a product of that enzyme. Over 40 dissociating enzymes are described from 3 major metabolic areas: carbohydrate metabolism, nucleotide metabolism, and amino acid metabolism. Important variables that influence enzyme dissociation include: enzyme concentration, ligand concentration, other cellular proteins, pH, and temperature. All these variables can be readily manipulated in vitro, but normally only the first two are physiological variables. Seven of these enzymes are most active as the dissociated monomer, the others as oligomers, emphasizing the importance of a regulated equilibrium between 2 or more conformational states. Experiments to test whether enzyme dissociation occurs in vivo showed this to be the case in 6 out of 7 studies, with 4 different enzymes.

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Year:  1994        PMID: 8026214     DOI: 10.3109/10409239409086799

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  31 in total

1.  Thermodynamic characterization of yeast triosephosphate isomerase refolding: insights into the interplay between function and stability as reasons for the oligomeric nature of the enzyme.

Authors:  Hugo Nájera; Miguel Costas; D Alejandro Fernández-Velasco
Journal:  Biochem J       Date:  2003-03-15       Impact factor: 3.857

2.  Dissecting homo-heptamer thermodynamics by isothermal titration calorimetry: entropy-driven assembly of co-chaperonin protein 10.

Authors:  Kathryn Luke; David Apiyo; Pernilla Wittung-Stafshede
Journal:  Biophys J       Date:  2005-08-12       Impact factor: 4.033

3.  Functional and structural characterization of factor Xa dimer in solution.

Authors:  Rima Chattopadhyay; Roxana Iacob; Shalmali Sen; Rinku Majumder; Kenneth B Tomer; Barry R Lentz
Journal:  Biophys J       Date:  2009-02       Impact factor: 4.033

4.  Evolution of (p)ppGpp-HPRT regulation through diversification of an allosteric oligomeric interaction.

Authors:  Brent W Anderson; Kuanqing Liu; Christine Wolak; Katarzyna Dubiel; Fukang She; Kenneth A Satyshur; James L Keck; Jue D Wang
Journal:  Elife       Date:  2019-09-25       Impact factor: 8.140

5.  Statistical analysis of interface similarity in crystals of homologous proteins.

Authors:  Qifang Xu; Adrian A Canutescu; Guoli Wang; Maxim Shapovalov; Zoran Obradovic; Roland L Dunbrack
Journal:  J Mol Biol       Date:  2008-06-07       Impact factor: 5.469

6.  Disruption of the aldolase A tetramer into catalytically active monomers.

Authors:  P T Beernink; D R Tolan
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-28       Impact factor: 11.205

7.  Recombinant expression of rat glycine N-methyltransferase and evidence for contribution of N-terminal acetylation to co-operative binding of S-adenosylmethionine.

Authors:  H Ogawa; T Gomi; Y Takata; T Date; M Fujioka
Journal:  Biochem J       Date:  1997-10-15       Impact factor: 3.857

8.  Bacilli glutamate dehydrogenases diverged via coevolution of transcription and enzyme regulation.

Authors:  Lianet Noda-Garcia; Maria Luisa Romero Romero; Liam M Longo; Ilana Kolodkin-Gal; Dan S Tawfik
Journal:  EMBO Rep       Date:  2017-05-03       Impact factor: 8.807

9.  Oligomerization inhibits Legionella pneumophila PlaB phospholipase A activity.

Authors:  Katja Kuhle; Joern Krausze; Ute Curth; Manfred Rössle; Klaus Heuner; Christina Lang; Antje Flieger
Journal:  J Biol Chem       Date:  2014-05-08       Impact factor: 5.157

10.  Substitutions in the aspartate transcarbamoylase domain of hamster CAD disrupt oligomeric structure.

Authors:  Y Qiu; J N Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

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