Literature DB >> 8019133

Filtering methods for selection of singlet and doublet signals in NMR spectra of DNA oligomers.

C Kojima1, Y Kyogoku.   

Abstract

The base proton (purine H8 and pyrimidine H6) resonances are key signals for the assignment of the proton resonances of DNA oligomers. They are classified into two groups, i.e., cytosine H6 signals, observed as doublets, and the other base proton signals, observed as singlets. Here we propose some experiments for distinguishing the cytosine H6 signals from the other base proton signals. Moreover, the ability of signal selection and the sensitivity as to signal detection were compared for all experiments, and the optimum conditions for spectral measurements were surveyed. Some of the experiments were employed as the NOESY detection pulse. Previously proposed experiments, such as HOENOE and HAL, were also used in the comparison.

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Year:  1994        PMID: 8019133     DOI: 10.1007/bf00175246

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  5 in total

Review 1.  1H NMR spectroscopy of DNA.

Authors:  J Feigon; V Sklenár; E Wang; D E Gilbert; R F Macaya; P Schultze
Journal:  Methods Enzymol       Date:  1992       Impact factor: 1.600

Review 2.  Nucleic acids and nuclear magnetic resonance.

Authors:  F J Van de Ven; C W Hilbers
Journal:  Eur J Biochem       Date:  1988-12-01

3.  Improved spectral resolution in cosy 1H NMR spectra of proteins via double quantum filtering.

Authors:  M Rance; O W Sørensen; G Bodenhausen; G Wagner; R R Ernst; K Wüthrich
Journal:  Biochem Biophys Res Commun       Date:  1983-12-16       Impact factor: 3.575

4.  Assignment of the non-exchangeable proton resonances of d(C-G-C-G-A-A-T-T-C-G-C-G) using two-dimensional nuclear magnetic resonance methods.

Authors:  D R Hare; D E Wemmer; S H Chou; G Drobny; B R Reid
Journal:  J Mol Biol       Date:  1983-12-15       Impact factor: 5.469

5.  Interaction of berenil with the EcoRI dodecamer d(CGCGAATTCGCG)2 in solution studied by NMR.

Authors:  A N Lane; T C Jenkins; T Brown; S Neidle
Journal:  Biochemistry       Date:  1991-02-05       Impact factor: 3.162

  5 in total

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