Literature DB >> 8011646

Active site coordination chemistry of the cytochrome c peroxidase Asp235Ala variant: spectroscopic and functional characterization.

J C Ferrer1, P Turano, L Banci, I Bertini, I K Morris, K M Smith, M Smith, A G Mauk.   

Abstract

Asp235 in yeast cytochrome c peroxidase forms a hydrogen bond with His175, the proximal histidyl residue, that has been suggested to be important in determining the electronic properties of the heme iron and that may be involved in stabilizing the higher oxidation states of the peroxidase that form transiently during catalysis. The current study employs 1H and 15N-NMR spectroscopy to study the electronic properties of and the effects of pH on the active site of the Asp235Ala variant. This variant exhibits three spectroscopic species between pH 5 and 9: a high-spin species that forms at low pH and two low-spin species that form successively at higher pH. Nevertheless, the activity of the variant exhibits a pH dependence virtually identical to that of the wild-type protein, though the activity of the variant is 3 orders of magnitude lower at all values of pH between pH 5 and 8.5. These findings suggest that the spin state and coordination environment of the heme iron in cytochrome c peroxidase do not dictate the rate of substrate (cytochrome c) oxidation. Binding of cyanide to the variant enzyme results in formation of a single species as detected by NMR spectroscopy. Analysis of high-resolution 1D and 2D 1H-NMR and 15N-NMR spectra of the cyanide adduct has permitted characterization of the properties of this derivative and the strength of the proximal ligand bond to the heme iron. Disruption of the hydrogen bond between the proximal histidine and Asp235 that exists in the wild-type enzyme dramatically reduces the strength of the interaction between the proximal ligand and the iron; this effect combined with concurrent changes in the distal heme-binding pocket accounts for the increase in reduction potential reported for the Fe3+/Fe2+ couple. The catalytic consequences of the structural and electronic properties of the variant elucidated in this study are discussed.

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Year:  1994        PMID: 8011646     DOI: 10.1021/bi00191a009

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  Redox equilibria of manganese peroxidase from Phanerochaetes chrysosporium: functional role of residues on the proximal side of the haem pocket.

Authors:  R Santucci; C Bongiovanni; S Marini; M Tien; L Banci; M Coletta
Journal:  Biochem J       Date:  2000-07-01       Impact factor: 3.857

2.  Constraints on the Radical Cation Center of Cytochrome c Peroxidase for Electron Transfer from Cytochrome c.

Authors:  Thomas M Payne; Estella F Yee; Boris Dzikovski; Brian R Crane
Journal:  Biochemistry       Date:  2016-08-17       Impact factor: 3.162

3.  N epsilon,N epsilon-dimethyl-lysine cytochrome c as an NMR probe for lysine involvement in protein-protein complex formation.

Authors:  G R Moore; M C Cox; D Crowe; M J Osborne; F I Rosell; J Bujons; P D Barker; M R Mauk; A G Mauk
Journal:  Biochem J       Date:  1998-06-01       Impact factor: 3.857

4.  Structural and spectroscopic studies of azide complexes of horse heart myoglobin and the His-64-->Thr variant.

Authors:  R Maurus; R Bogumil; N T Nguyen; A G Mauk; G Brayer
Journal:  Biochem J       Date:  1998-05-15       Impact factor: 3.857

5.  Reduction potential of yeast cytochrome c peroxidase and three distal histidine mutants: dependence on pH.

Authors:  Cory M DiCarlo; Lidia B Vitello; James E Erman
Journal:  J Inorg Biochem       Date:  2011-01-09       Impact factor: 4.155

Review 6.  Electron transfer between cytochrome c and cytochrome c peroxidase.

Authors:  F Millett; M A Miller; L Geren; B Durham
Journal:  J Bioenerg Biomembr       Date:  1995-06       Impact factor: 2.945

7.  Heme attachment motif mobility tunes cytochrome c redox potential.

Authors:  Lea V Michel; Tao Ye; Sarah E J Bowman; Benjamin D Levin; Megan A Hahn; Brandy S Russell; Sean J Elliott; Kara L Bren
Journal:  Biochemistry       Date:  2007-09-28       Impact factor: 3.162

  7 in total

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