Literature DB >> 8011076

Abalone myoglobins evolved from indoleamine dioxygenase: the cDNA-derived amino acid sequence of myoglobin from Nordotis madaka.

T Suzuki1.   

Abstract

The cDNA for the unusual 41 kD myoglobin of the abalone Nordotis madaka was amplified by polymerase chain reaction (PCR), and the cDNA-derived amino acid sequence of 378 residues was determined. As with the myoglobin of the related abalone Sulculus diversicolor (Suzuki and Takagi, J. Mol. Biol. 228, 698-700, 1992), the sequence of Nordotis myoglobin showed no significant homology with any other globins, but showed high homology (35% identity) with vertebrate indoleamine 2,3-dioxygenase, a tryptophan degrading enzyme containing heme. The amino acid sequence homology between Nordotis and Sulculus myoglobins was 87%. These results support our previous idea that the abalone myoglobins evolved from a gene for indoleamine dioxygenase, but not from a globin gene, and therefore all of the hemoglobins ard myoglobins are not homologous. Thus, abalone myoglobins appear to be a typical case of convergent evolution.

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Year:  1994        PMID: 8011076     DOI: 10.1007/bf01891987

Source DB:  PubMed          Journal:  J Protein Chem        ISSN: 0277-8033


  14 in total

1.  Molecular cloning, sequencing and expression of human interferon-gamma-inducible indoleamine 2,3-dioxygenase cDNA.

Authors:  W Dai; S L Gupta
Journal:  Biochem Biophys Res Commun       Date:  1990-04-16       Impact factor: 3.575

2.  Primary structure of human indoleamine 2,3-dioxygenase deduced from the nucleotide sequence of its cDNA.

Authors:  S Tone; O Takikawa; A Habara-Ohkubo; A Kadoya; R Yoshida; R Kido
Journal:  Nucleic Acids Res       Date:  1990-01-25       Impact factor: 16.971

3.  Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase.

Authors:  R K Saiki; D H Gelfand; S Stoffel; S J Scharf; R Higuchi; G T Horn; K B Mullis; H A Erlich
Journal:  Science       Date:  1988-01-29       Impact factor: 47.728

4.  Distal residues in the oxygen binding site of haemoglobin studied by protein engineering.

Authors:  K Nagai; B Luisi; D Shih; G Miyazaki; K Imai; C Poyart; A De Young; L Kwiatkowsky; R W Noble; S H Lin
Journal:  Nature       Date:  1987 Oct 29-Nov 4       Impact factor: 49.962

5.  Progressive sequence alignment as a prerequisite to correct phylogenetic trees.

Authors:  D F Feng; R F Doolittle
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

6.  Neutron diffraction reveals oxygen-histidine hydrogen bond in oxymyoglobin.

Authors:  S E Phillips; B P Schoenborn
Journal:  Nature       Date:  1981-07-02       Impact factor: 49.962

7.  Cloning and expression of a cDNA encoding mouse indoleamine 2,3-dioxygenase.

Authors:  A Habara-Ohkubo; O Takikawa; R Yoshida
Journal:  Gene       Date:  1991-09-15       Impact factor: 3.688

8.  Rearrangement of the distal pocket accompanying E7 His----Gln substitution in elephant carbonmonoxy- and oxymyoglobin: 1H NMR identification of a new aromatic residue in the heme pocket.

Authors:  L P Yu; G N La Mar; H Mizukami
Journal:  Biochemistry       Date:  1990-03-13       Impact factor: 3.162

9.  A myoglobin evolved from indoleamine 2,3-dioxygenase.

Authors:  T Suzuki; T Takagi
Journal:  J Mol Biol       Date:  1992-11-20       Impact factor: 5.469

10.  Gene structure of human indoleamine 2,3-dioxygenase.

Authors:  A Kadoya; S Tone; H Maeda; Y Minatogawa; R Kido
Journal:  Biochem Biophys Res Commun       Date:  1992-11-30       Impact factor: 3.575

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  4 in total

1.  NADH oxidase activity of indoleamine 2,3-dioxygenase.

Authors:  Federico I Rosell; Hsin H Kuo; A Grant Mauk
Journal:  J Biol Chem       Date:  2011-06-20       Impact factor: 5.157

2.  Alignment of 700 globin sequences: extent of amino acid substitution and its correlation with variation in volume.

Authors:  O H Kapp; L Moens; J Vanfleteren; C N Trotman; T Suzuki; S N Vinogradov
Journal:  Protein Sci       Date:  1995-10       Impact factor: 6.725

3.  Nitric oxide dioxygenase: an enzymic function for flavohemoglobin.

Authors:  P R Gardner; A M Gardner; L A Martin; A L Salzman
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-01       Impact factor: 11.205

4.  Probing the ternary complexes of indoleamine and tryptophan 2,3-dioxygenases by cryoreduction EPR and ENDOR spectroscopy.

Authors:  Roman M Davydov; Nishma Chauhan; Sarah J Thackray; J L Ross Anderson; Nektaria D Papadopoulou; Christopher G Mowat; Stephen K Chapman; Emma L Raven; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2010-04-21       Impact factor: 15.419

  4 in total

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