Literature DB >> 8011065

Substitution of the amino acid at position 102 with polar and aromatic residues influences substrate specificity of lactate dehydrogenase.

D J Nicholls1, M Davey, S E Jones, J Miller, J J Holbrook, A R Clarke, M D Scawen, T Atkinson, C R Goward.   

Abstract

The Gln residue at amino acid position 102 of Bacillus stearothermophilus lactate dehydrogenase was replaced with Ser, Thr, Tyr, or Phe to investigate the effect on substrate recognition. The Q102S and Q102T mutant enzymes were found to have a broader range of substrate specificity (measured by kcat/Km) than the wild-type enzyme. However, it is evident that either Ser or Thr at position 102 are of a size able to accommodate a wide variety of substrates in the active site and substrate specificity appears to rely largely on size discrimination in these mutants. The Q102F and Q102Y mutant enzymes have low catalytic efficiency and do not show this relaxed substrate specificity. However, their activities are restored by the presence of an aromatic substrate. All of the enzymes have a very low catalytic efficiency with branched chain aliphatic substrates.

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Year:  1994        PMID: 8011065     DOI: 10.1007/bf01892000

Source DB:  PubMed          Journal:  J Protein Chem        ISSN: 0277-8033


  13 in total

Review 1.  From analysis to synthesis: new ligand binding sites on the lactate dehydrogenase framework. Part I.

Authors:  A R Clarke; T Atkinson; J J Holbrook
Journal:  Trends Biochem Sci       Date:  1989-03       Impact factor: 13.807

Review 2.  From analysis to synthesis: new ligand binding sites on the lactate dehydrogenase framework. Part II.

Authors:  A R Clarke; T Atkinson; J J Holbrook
Journal:  Trends Biochem Sci       Date:  1989-04       Impact factor: 13.807

3.  Design and synthesis of new enzymes based on the lactate dehydrogenase framework.

Authors:  C R Dunn; H M Wilks; D J Halsall; T Atkinson; A R Clarke; H Muirhead; J J Holbrook
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1991-05-29       Impact factor: 6.237

4.  The use of genetically engineered tryptophan to identify the movement of a domain of B. stearothermophilus lactate dehydrogenase with the process which limits the steady-state turnover of the enzyme.

Authors:  A D Waldman; K W Hart; A R Clarke; D B Wigley; D A Barstow; T Atkinson; W N Chia; J J Holbrook
Journal:  Biochem Biophys Res Commun       Date:  1988-01-29       Impact factor: 3.575

5.  The pMTL nic- cloning vectors. I. Improved pUC polylinker regions to facilitate the use of sonicated DNA for nucleotide sequencing.

Authors:  S P Chambers; S E Prior; D A Barstow; N P Minton
Journal:  Gene       Date:  1988-08-15       Impact factor: 3.688

6.  Redesigning enzyme structure by site-directed mutagenesis: tyrosyl tRNA synthetase and ATP binding.

Authors:  G Winter; A R Fersht; A J Wilkinson; M Zoller; M Smith
Journal:  Nature       Date:  1982-10-21       Impact factor: 49.962

7.  Structure of the active ternary complex of pig heart lactate dehydrogenase with S-lac-NAD at 2.7 A resolution.

Authors:  U M Grau; W E Trommer; M G Rossmann
Journal:  J Mol Biol       Date:  1981-09-15       Impact factor: 5.469

8.  A strong carboxylate-arginine interaction is important in substrate orientation and recognition in lactate dehydrogenase.

Authors:  K W Hart; A R Clarke; D B Wigley; A D Waldman; W N Chia; D A Barstow; T Atkinson; J B Jones; J J Holbrook
Journal:  Biochim Biophys Acta       Date:  1987-08-21

9.  Cloning, expression and complete nucleotide sequence of the Bacillus stearothermophilus L-lactate dehydrogenase gene.

Authors:  D A Barstow; A R Clarke; W N Chia; D Wigley; A F Sharman; J J Holbrook; T Atkinson; N P Minton
Journal:  Gene       Date:  1986       Impact factor: 3.688

10.  A specific, highly active malate dehydrogenase by redesign of a lactate dehydrogenase framework.

Authors:  H M Wilks; K W Hart; R Feeney; C R Dunn; H Muirhead; W N Chia; D A Barstow; T Atkinson; A R Clarke; J J Holbrook
Journal:  Science       Date:  1988-12-16       Impact factor: 47.728

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  1 in total

1.  Enzymatic and physico-chemical characteristics of recombinant cMDH and mMDH of Clonorchis sinensis.

Authors:  Nancai Zheng; Baoming Huang; Jin Xu; Shansheng Huang; Jinzhong Chen; Xuchu Hu; Kang Ying; Xinbing Yu
Journal:  Parasitol Res       Date:  2006-03-16       Impact factor: 2.289

  1 in total

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