Literature DB >> 8008833

cDNA libraries from a few neural cells.

S Korneev1, S Blackshaw, J A Davies.   

Abstract

One of the most powerful approaches to the molecular analysis of differential gene expression is to construct cDNA libraries corresponding to different tissues or developmental stages, and then to enrich for genes expressed in a particular tissue or at a particular time by subtractive hybridisation. Our aim is to reduce the complexity of neuronal cDNA libraries by generating libraries from the mRNA of a single cell. The system chosen is the Retzius cell of the leech, a large neurone which can be unambiguously dissected out. A cDNA library was generated from one leech ganglion (containing about 400 neurons) by anchor 1-oligo dT priming, the addition of dG tails, second strand synthesis primed by an anchor 2-oligo dC primer, followed by PCR from the two anchor regions. XBaI and EcoRI sites were included in the respective anchor primers, between the dT or dC run and the PCR primer sequence, allowing high-efficiency directional cloning. Eight clones picked and sequenced at random gave five with some homology to a known protein and three novel genes. The average insert size in the library was 600 bp, 0.2% of the clones hybridised to repetitive DNA, and 20/30,000 clones gave signals with the Drosophila actin gene. This approach has now been extended to a few pooled Retzius cells.

Entities:  

Mesh:

Substances:

Year:  1994        PMID: 8008833     DOI: 10.1016/0301-0082(94)90074-4

Source DB:  PubMed          Journal:  Prog Neurobiol        ISSN: 0301-0082            Impact factor:   11.685


  5 in total

1.  Promotion of regeneration and axon growth following injury in an invertebrate nervous system by the use of three-dimensional collagen gels.

Authors:  S E Blackshaw; S Arkison; C Cameron; J A Davies
Journal:  Proc Biol Sci       Date:  1997-05-22       Impact factor: 5.349

2.  Hirudo medicinalis: a platform for investigating genes in neural repair.

Authors:  W Z Wang; R D Emes; K Christoffers; J Verrall; S E Blackshaw
Journal:  Cell Mol Neurobiol       Date:  2005-03       Impact factor: 5.046

Review 3.  Identifying genes for neuron survival and axon outgrowth in Hirudo medicinalis.

Authors:  S E Blackshaw; E J Babington; R D Emes; J Malek; W-Z Wang
Journal:  J Anat       Date:  2004-01       Impact factor: 2.610

4.  A subtractive cDNA library from an identified regenerating neuron is enriched in sequences up-regulated during nerve regeneration.

Authors:  S Korneev; A Fedorov; R Collins; S E Blackshaw; J A Davies
Journal:  Invert Neurosci       Date:  1997 Sep-Dec

5.  Optimal RNA isolation method and primer design to detect gene knockdown by qPCR when validating Drosophila transgenic RNAi lines.

Authors:  Roslyn L Mainland; Taylor A Lyons; Mike M Ruth; Jamie M Kramer
Journal:  BMC Res Notes       Date:  2017-11-29
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.