Literature DB >> 8003624

Unusually stable beta-sheet formation in an ionic self-complementary oligopeptide.

S Zhang1, C Lockshin, R Cook, A Rich.   

Abstract

A 16-residue amphiphilic oligopeptide (EAK16) with every other residue alanine and also containing glutamic acid and lysine (Ac-NH-AEAEAKAKAEAEAKAK-CONH2) is able to form an unusually stable beta-sheet structure. The beta-sheet structure is stable at very low concentrations in water and at high temperatures. Various pH changes at 1.5, 3, 7, and 11 had little effect on the stability of the beta-sheet structure. The beta-sheet structure was not altered significantly even in the presence of 0.1% SDS, 7 molar guanidine hydrochloride, or 8 molar urea. One of the structural characteristics of the EAK16 is its ionic self-complementarity in that ionic bonds and hydrogen bonds between Glu and Lys can form readily between two oligopeptide beta-sheet structures. This structural feature is probably one of the factors that promotes its extreme stability. This is the first example of such an extended ionic self-complementarity in a protein structure. EAK16 and its related peptides may have applications as useful biomaterials. It also offers a good model for studying the mechanism of beta-sheet formation. Because the oligopeptide can self-assemble to form a membranous structure, it may have relevance to origin of life research.

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Year:  1994        PMID: 8003624     DOI: 10.1002/bip.360340508

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  49 in total

1.  Conformational behavior of ionic self-complementary peptides.

Authors:  M Altman; P Lee; A Rich; S Zhang
Journal:  Protein Sci       Date:  2000-06       Impact factor: 6.725

2.  Concentration effect on the aggregation of a self-assembling oligopeptide.

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3.  Self-assembly of the ionic peptide EAK16: the effect of charge distributions on self-assembly.

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6.  Repeated rapid shear-responsiveness of peptide hydrogels with tunable shear modulus.

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Journal:  Biomacromolecules       Date:  2005 May-Jun       Impact factor: 6.988

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8.  Molecular dynamics simulations on the oligomer-formation process of the GNNQQNY peptide from yeast prion protein Sup35.

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Journal:  Biophys J       Date:  2007-05-04       Impact factor: 4.033

Review 9.  Deformation and failure of protein materials in physiologically extreme conditions and disease.

Authors:  Markus J Buehler; Yu Ching Yung
Journal:  Nat Mater       Date:  2009-03       Impact factor: 43.841

10.  Elastic deformation and failure in protein filament bundles: Atomistic simulations and coarse-grained modeling.

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Journal:  Biomaterials       Date:  2008-04-25       Impact factor: 12.479

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