Literature DB >> 8001974

Syntenic assignment of human chromosome 1 homologous loci in the bovine.

D S Threadgill1, D W Threadgill, Y D Moll, J A Weiss, N Zhang, H W Davey, A G Wildeman, J E Womack.   

Abstract

Three mouse chromosomes (MMU 1, 3, and 4) carry homologs of human chromosome 1 (HSA 1) genes. A similar situation is found in the bovine, where five bovine chromosomes (BTA 2, 3, 5, 16, and unassigned syntenic group U25) contain homologs of HSA 1 loci. To evaluate further the syntenic relationship of HSA 1 homologs in cattle, 10 loci have been physically mapped through segregation analysis in bovine-rodent hybrid somatic cells. These loci, chosen for their location on HSA 1, are antithrombin 3 (AT3), renin (REN), complement component receptor 2 (CR2), phosphofructokinase muscle type (PFKM), Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog (FGR), alpha fucosidase (FUCA1), G-protein beta 1 subunit (GNB1), alpha 1A amylase, (AMY1), the neuroblastoma RAS viral (v-ras) oncogene homolog (NRAS), and alpha skeletal actin (ACTA1). AT3, REN, CR2, and GNB1 mapped to BTA 16, PFKM to BTA 5, AMY1A and NRAS to BTA 3, FGR and FUCA1 to BTA 2, and ACTA1 to BTA 28.

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Year:  1994        PMID: 8001974     DOI: 10.1006/geno.1994.1436

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  6 in total

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Authors:  H Klungland; L Gomez-Raya; C J Howard; R A Collins; S Rogne; S Lien
Journal:  Mamm Genome       Date:  1997-08       Impact factor: 2.957

2.  Synteny mapping in river buffalo.

Authors:  S M El Nahas; H A Oraby; H A de Hondt; A M Medhat; M M Zahran; E R Mahfouz; A M Karim
Journal:  Mamm Genome       Date:  1996-11       Impact factor: 2.957

3.  Mapping of eight human chromosome 1 orthologs to cattle chromosomes 3 and 16.

Authors:  J E Beever; S R Fisher; G Guérin; H A Lewin
Journal:  Mamm Genome       Date:  1997-07       Impact factor: 2.957

4.  Comparative mapping in cattle of genes located on human chromosome 18.

Authors:  M K Agaba; S J Kemp; W Barendse; A Teale
Journal:  Mamm Genome       Date:  1997-07       Impact factor: 2.957

5.  Localization of the antigen CD3, zeta polypeptide (CD3Z) to cattle chromosome 3q11-q14.

Authors:  M R Amarante; H A Ansari; D W Maher; P D Pearce; T E Broad
Journal:  Mamm Genome       Date:  1996-05       Impact factor: 2.957

6.  Identification of muscle-specific candidate genes in Simmental beef cattle using imputed next generation sequencing.

Authors:  Farhad Bordbar; Just Jensen; Bo Zhu; Zezhao Wang; Lei Xu; Tianpeng Chang; Ling Xu; Min Du; Lupei Zhang; Huijiang Gao; Lingyang Xu; Junya Li
Journal:  PLoS One       Date:  2019-10-10       Impact factor: 3.240

  6 in total

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