Literature DB >> 7961951

1H NMR investigation of distal mutant deoxy myoglobins. Interpretation of proximal His contact shifts in terms of a localized distal water molecule.

G N La Mar1, F Dalichow, X Zhao, Y Dou, M Ikeda-Saito, M L Chiu, S G Sligar.   

Abstract

1H NMR spectra of a series of distal point mutants of human and sperm whale deoxy myoglobin have been recorded and their spectral parameters compared with those of wild type. The substitutions investigated include His64(E7)-->Gly, Ala, Val, Leu, Ile, and Gln and Val68(E11)-->Ala, Ile. The three resonances from the proximal His F8 imidazole ring, as well as two heme methyl signals, are identified in each of the proteins. Significant perturbations of the NMR spectra of mutant deoxy myoglobins (Mbs) occurred only upon substitution of His64(E7) by any non-polar residue, with only minor variation in parameters throughout the range of side chains. These spectral changes are attributed to the elimination of a non-coordinated ordered water molecule in the distal pocket found hydrogen bonded to His64(E7) in crystals of wild-type deoxy Mb, but abolished in the His64(E7)-->Leu mutant deoxy Mb crystal (Quillin, M. L., Arduini, R. M., Olson, J. S., and Philips, G. N., Jr. (1993) J. Mol. Biol. 234, 140-155). The observed spectral changes, increased His F8 ring spin delocalization, and decreased heme in-plane asymmetry, can be directly attributed to the weakening of the effective axial field and a decrease in the asymmetry in the rhombic ligand field resulting from removal of the water molecule. The hyperfine shift patterns for the mutants His64(E7)-->Gln and Val68(E11)-->Ile deoxy Mbs are minimally perturbed from that of wild type and are interpreted to reflect a conserved distal water-binding site. In the point mutant Val68(E11)-->Ala, the decreased covalency to the axial His F8 is interpreted as reflecting a conserved distal water molecule that can interact more strongly with the iron due to the reduced steric bulk of the E11 side chain. The differential 1H NMR spectral parameters for the His F8 resonances in the two subunits of T state deoxy Hb A are shown to be similarly consistent with the known occupation of the distal water binding site in the alpha-, but not beta-subunit.

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Year:  1994        PMID: 7961951

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  7 in total

1.  Differential Interaction of Myoglobin with Select Fatty Acids of Carbon Chain Lengths C8 to C16.

Authors:  Thomas Jue; Lifan Shih; Youngran Chung
Journal:  Lipids       Date:  2017-06-21       Impact factor: 1.880

2.  Water and ligand entry in myoglobin: assessing the speed and extent of heme pocket hydration after CO photodissociation.

Authors:  Robert A Goldbeck; Shyam Bhaskaran; Cheri Ortega; Juan L Mendoza; John S Olson; Jayashree Soman; David S Kliger; Raymond M Esquerra
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

3.  Kinetic spectroscopy of heme hydration and ligand binding in myoglobin and isolated hemoglobin chains: an optical window into heme pocket water dynamics.

Authors:  Raymond M Esquerra; Ignacio López-Peña; Pooncharas Tipgunlakant; Ivan Birukou; Rosa L Nguyen; Jayashree Soman; John S Olson; David S Kliger; Robert A Goldbeck
Journal:  Phys Chem Chem Phys       Date:  2010-07-29       Impact factor: 3.676

4.  Variation and analysis of second-sphere interactions and axial histidinate character in c-type cytochromes.

Authors:  Sarah E J Bowman; Kara L Bren
Journal:  Inorg Chem       Date:  2010-09-06       Impact factor: 5.165

5.  NMR investigation of the heme electronic structure in deoxymyoglobin possessing a fluorinated heme.

Authors:  Yasuhiko Yamamoto; Satoshi Nagao; Yueki Hirai; Tatsunori Inose; Norifumi Terui; Hajime Mita; Akihiro Suzuki
Journal:  J Biol Inorg Chem       Date:  2003-12-18       Impact factor: 3.358

6.  Myoglobin mutants giving the largest geminate yield in CO rebinding in the nanosecond time domain.

Authors:  T Sugimoto; M Unno; Y Shiro; Y Dou; M Ikeda-Saito
Journal:  Biophys J       Date:  1998-11       Impact factor: 4.033

7.  Optical detection of disordered water within a protein cavity.

Authors:  Robert A Goldbeck; Marlisa L Pillsbury; Russell A Jensen; Juan L Mendoza; Rosa L Nguyen; John S Olson; Jayashree Soman; David S Kliger; Raymond M Esquerra
Journal:  J Am Chem Soc       Date:  2009-09-02       Impact factor: 15.419

  7 in total

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