Literature DB >> 7945383

Recognition DNA sequence of a novel putative transcription factor, BCL6.

N Kawamata1, T Miki, K Ohashi, K Suzuki, T Fukuda, S Hirosawa, N Aoki.   

Abstract

The BCL6 gene involved in the 3q27 translocation associated with B-cell lymphomas encodes a novel Cys2-His2 zinc finger protein. We generated a fusion protein of glutathione S-transferase and zinc finger domain of BCL6 to determine recognition sequences of BCL6 with polymerase chain reaction using random oligonucleotides of 26 bases as a ligand. A consensus of 14 nucleotides consisting of (T/A)NCTTTCNAGG(A/G)AT was identified in the recognition sequences. In a gel mobility shift assay, the probe containing the 14-nucleotide recognition sequence formed a complex with the fusion protein and nuclear proteins from Burkitt's cell lines overexpressing the BCL6 transcripts. The consensus sequence was protected from the digestion by nuclease in a DNase I footprinting assay. In conclusion, BCL6 may be involved in tumorigenesis by binding to the consensus sequences of the other genes.

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Year:  1994        PMID: 7945383     DOI: 10.1006/bbrc.1994.2468

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  20 in total

1.  BCL-6, a POZ/zinc-finger protein, is a sequence-specific transcriptional repressor.

Authors:  C C Chang; B H Ye; R S Chaganti; R Dalla-Favera
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-09       Impact factor: 11.205

2.  Integrated biochemical and computational approach identifies BCL6 direct target genes controlling multiple pathways in normal germinal center B cells.

Authors:  Katia Basso; Masumichi Saito; Pavel Sumazin; Adam A Margolin; Kai Wang; Wei-Keat Lim; Yukiko Kitagawa; Christof Schneider; Mariano J Alvarez; Andrea Califano; Riccardo Dalla-Favera
Journal:  Blood       Date:  2009-12-03       Impact factor: 22.113

3.  Mapping of the mouse Bcl6 gene to chromosome 16.

Authors:  X Liao; D J Gilbert; A Dent; L M Staudt; N A Jenkins; N G Copeland
Journal:  Mamm Genome       Date:  1996-08       Impact factor: 2.957

4.  Development of chronic allergic responses by dampening Bcl6-mediated suppressor activity in memory T helper 2 cells.

Authors:  Takashi Ogasawara; Masahiko Hatano; Hisae Satake; Jun Ikari; Toshibumi Taniguchi; Nobuhide Tsuruoka; Haruko Watanabe-Takano; Lisa Fujimura; Akemi Sakamoto; Hirokuni Hirata; Kumiya Sugiyama; Yasutsugu Fukushima; Susumu Nakae; Kenji Matsumoto; Hirohisa Saito; Takeshi Fukuda; Kazuhiro Kurasawa; Koichiro Tatsumi; Takeshi Tokuhisa; Masafumi Arima
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

Review 5.  BACH2-BCL6 balance regulates selection at the pre-B cell receptor checkpoint.

Authors:  Srividya Swaminathan; Cihangir Duy; Markus Müschen
Journal:  Trends Immunol       Date:  2013-12-10       Impact factor: 16.687

6.  Defining the epigenetic actions of growth hormone: acute chromatin changes accompany GH-activated gene transcription.

Authors:  Dennis J Chia; Peter Rotwein
Journal:  Mol Endocrinol       Date:  2010-08-11

7.  A systems biology approach to transcription factor binding site prediction.

Authors:  Xiang Zhou; Pavel Sumazin; Presha Rajbhandari; Andrea Califano
Journal:  PLoS One       Date:  2010-03-26       Impact factor: 3.240

8.  Repression of the PDCD2 gene by BCL6 and the implications for the pathogenesis of human B and T cell lymphomas.

Authors:  Beverly W Baron; Nancy Zeleznik-Le; Miriam J Baron; Catherine Theisler; Dezheng Huo; Matthew D Krasowski; Michael J Thirman; Rebecca M Baron; Joseph M Baron
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-27       Impact factor: 11.205

Review 9.  Minireview: mechanisms of growth hormone-mediated gene regulation.

Authors:  Dennis J Chia
Journal:  Mol Endocrinol       Date:  2014-05-13

10.  Male-specific hepatic Bcl6: growth hormone-induced block of transcription elongation in females and binding to target genes inversely coordinated with STAT5.

Authors:  Rosana D Meyer; Ekaterina V Laz; Ting Su; David J Waxman
Journal:  Mol Endocrinol       Date:  2009-10-01
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