Literature DB >> 7894488

A 300 kilobase interval genetic map of rice including 883 expressed sequences.

N Kurata1, Y Nagamura, K Yamamoto, Y Harushima, N Sue, J Wu, B A Antonio, A Shomura, T Shimizu, S Y Lin.   

Abstract

We have constructed a high resolution rice genetic map containing 1,383 DNA markers at an average interval of 300 kilobases (kb). The markers, distributed along 1,575 cM on 12 linkage groups, comprise 883 cDNAs, 265 genomic DNAs, 147 randomly amplified polymorphic DNAs (RAPD) and 88 other DNAs. cDNAs were derived from rice root and callus, analysed by single-run sequencing and searched for similarities with known proteins. Nearly 260 rice genes are newly identified and mapped, and genomic DNA and cloned RAPD fragments were also sequenced to generate STSs. Our map is the first significant gene expression map in plants. It is also the densest genetic map available in plants and the first to be backed up comprehensively by clone sequence data.

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Year:  1994        PMID： 7894488     DOI： 10.1038/ng1294-365

Source DB:  PubMed          Journal:  Nat Genet        ISSN： 1061-4036            Impact factor:   38.330


  129 in total

1.  Induction and characterization of Ph1 wheat mutants.

Authors:  M A Roberts; S M Reader; C Dalgliesh; T E Miller; T N Foote; L J Fish; J W Snape; G Moore
Journal:  Genetics       Date:  1999-12       Impact factor: 4.562

2.  A maize map standard with sequenced core markers, grass genome reference points and 932 expressed sequence tagged sites (ESTs) in a 1736-locus map.

Authors:  G L Davis; M D McMullen; C Baysdorfer; T Musket; D Grant; M Staebell; G Xu; M Polacco; L Koster; S Melia-Hancock; K Houchins; S Chao; E H Coe
Journal:  Genetics       Date:  1999-07       Impact factor: 4.562

3.  Arabidopsis-rice: will colinearity allow gene prediction across the eudicot-monocot divide?

Authors:  K M Devos; J Beales; Y Nagamura; T Sasaki
Journal:  Genome Res       Date:  1999-09       Impact factor: 9.043

4.  Identification of heading date quantitative trait locus Hd6 and characterization of its epistatic interactions with Hd2 in rice using advanced backcross progeny.

Authors:  T Yamamoto; H Lin; T Sasaki; M Yano
Journal:  Genetics       Date:  2000-02       Impact factor: 4.562

5.  Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS.

Authors:  M Yano; Y Katayose; M Ashikari; U Yamanouchi; L Monna; T Fuse; T Baba; K Yamamoto; Y Umehara; Y Nagamura; T Sasaki
Journal:  Plant Cell       Date:  2000-12       Impact factor: 11.277

6.  Importance of epistasis as the genetic basis of heterosis in an elite rice hybrid.

Authors:  S B Yu; J X Li; C G Xu; Y F Tan; Y J Gao; X H Li; Q Zhang; M A Saghai Maroof
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-19       Impact factor: 11.205

7.  Hd6, a rice quantitative trait locus involved in photoperiod sensitivity, encodes the alpha subunit of protein kinase CK2.

Authors:  Y Takahashi; A Shomura; T Sasaki; M Yano
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-19       Impact factor: 11.205

8.  A genome-wide survey of reproductive barriers in an intraspecific hybrid.

Authors:  Y Harushima; M Nakagahra; M Yano; T Sasaki; N Kurata
Journal:  Genetics       Date:  2001-10       Impact factor: 4.562

9.  A rice spotted leaf gene, Spl7, encodes a heat stress transcription factor protein.

Authors:  Utako Yamanouchi; Masahiro Yano; Hongxuan Lin; Motoyuki Ashikari; Kyoji Yamada
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

10.  Mapping QTLs associated with drought avoidance in upland rice grown in the Philippines and West Africa.

Authors:  Adam H Price; John Townend; Monty P Jones; Alain Audebert; Brigitte Courtois
Journal:  Plant Mol Biol       Date:  2002 Mar-Apr       Impact factor: 4.076
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