Literature DB >> 7893702

Biosynthesis of riboflavin. Studies on the reaction mechanism of 6,7-dimethyl-8-ribityllumazine synthase.

K Kis1, R Volk, A Bacher.   

Abstract

The lumazine synthase/riboflavin synthase complex of Bacillus subtilis consists of an icosahedral capsid of 60 beta subunits surrounding a core of 3 alpha subunits. The beta subunits catalyze the condensation of 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione with (3S)-3,4-dihydroxy-2-butanone under formation of 6,7-dimethyl-8-ribityllumazine. This intermediate is converted to riboflavin by the alpha subunits via an unusual dismutation yielding 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione as second product. (3R)- and (3S)-3,4-dihydroxy-2-butanone 4-phosphate were synthesized. Both enantiomers can serve as substrate for 6,7-dimethyl-8-ribityllumazine synthase. The reaction rate of the natural S-enantiomer is about 6-fold higher than that of the R-enantiomer. The Km value for (3S)-3,4-dihydroxy-2-butanone 4-phosphate is 130 microM, and the Km value for the pyrimidine substrate is 5 microM. Diacetyl and 3,4-dihydroxy-2-butanone 3-phosphate do not serve as substrates for lumazine synthase. The enzyme-catalyzed condensation of the carbohydrate with the pyrimidine is strictly regiospecific. The enzyme does not catalyze the exchange of protons between (3S)-3,4-dihydroxy-2-butanone 4-phosphate and solvent water in the absence of the pyrimidine cosubstrate. A reaction mechanism starting with the formation of a Schiff base followed by elimination of phosphate and cyclization is proposed. The lumazine synthase activities of the native enzyme complex and of reconstituted, hollow beta 60 capsids are virtually identical (about 12,000 nmol mg-1 h-1).

Entities:  

Mesh:

Substances:

Year:  1995        PMID: 7893702     DOI: 10.1021/bi00009a019

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

1.  Biosynthesis of riboflavin: an unusual riboflavin synthase of Methanobacterium thermoautotrophicum.

Authors:  S Eberhardt; S Korn; F Lottspeich; A Bacher
Journal:  J Bacteriol       Date:  1997-05       Impact factor: 3.490

2.  Crystal structure analysis of a pentameric fungal and an icosahedral plant lumazine synthase reveals the structural basis for differences in assembly.

Authors:  K Persson; G Schneider; D B Jordan; P V Viitanen; T Sandalova
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

3.  Virtual screening, selection and development of a benzindolone structural scaffold for inhibition of lumazine synthase.

Authors:  Arindam Talukdar; Ekaterina Morgunova; Jianxin Duan; Winfried Meining; Nicolas Foloppe; Lennart Nilsson; Adelbert Bacher; Boris Illarionov; Markus Fischer; Rudolf Ladenstein; Mark Cushman
Journal:  Bioorg Med Chem       Date:  2010-04-08       Impact factor: 3.641

4.  Structural basis for competitive inhibition of 3,4-dihydroxy-2-butanone-4-phosphate synthase from Vibrio cholerae.

Authors:  Zeyaul Islam; Adarsh Kumar; Suruchi Singh; Laurent Salmon; Subramanian Karthikeyan
Journal:  J Biol Chem       Date:  2015-03-18       Impact factor: 5.157

5.  O-Nucleoside, S-nucleoside, and N-nucleoside probes of lumazine synthase and riboflavin synthase.

Authors:  Arindam Talukdar; Yujie Zhao; Wei Lv; Adelbert Bacher; Boris Illarionov; Markus Fischer; Mark Cushman
Journal:  J Org Chem       Date:  2012-07-10       Impact factor: 4.354

6.  Impact of either elevated or decreased levels of cytochrome bd expression on Shigella flexneri virulence.

Authors:  S S Way; S Sallustio; R S Magliozzo; M B Goldberg
Journal:  J Bacteriol       Date:  1999-02       Impact factor: 3.490

7.  (15)N{(31)P} REDOR NMR studies of the binding of phosphonate reaction intermediate analogues to Saccharomyces cerevisiae lumazine synthase.

Authors:  Tsyr-Yan Yu; Robert D O'Connor; Astrid C Sivertsen; Colby Chiauzzi; Barbara Poliks; Markus Fischer; Adelbert Bacher; Ilka Haase; Mark Cushman; Jacob Schaefer
Journal:  Biochemistry       Date:  2008-12-30       Impact factor: 3.162

8.  Discovery and development of a small molecule library with lumazine synthase inhibitory activity.

Authors:  Arindam Talukdar; Meghan Breen; Adelbert Bacher; Boris Illarionov; Markus Fischer; Gunda Georg; Qi-Zhuang Ye; Mark Cushman
Journal:  J Org Chem       Date:  2009-08-07       Impact factor: 4.354

9.  Structural study and thermodynamic characterization of inhibitor binding to lumazine synthase from Bacillus anthracis.

Authors:  Ekaterina Morgunova; Boris Illarionov; Sabine Saller; Aleksander Popov; Thota Sambaiah; Adelbert Bacher; Mark Cushman; Markus Fischer; Rudolf Ladenstein
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-08-13

10.  Prediction of stability changes upon mutation in an icosahedral capsid.

Authors:  Samuel J Hickman; James F Ross; Emanuele Paci
Journal:  Proteins       Date:  2015-08-01
  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.