Literature DB >> 7892184

Exon skipping by overexpression of a Drosophila heterogeneous nuclear ribonucleoprotein in vivo.

J Shen1, K Zu, C L Cass, A L Beyer, J Hirsh.   

Abstract

Heterogeneous nuclear ribonucleoproteins (hnRNPs) are abundant RNA-binding proteins that are implicated in splicing regulation. Here we investigate the role of a Drosophila hnRNP in splicing regulation in living animals. We find that overexpression of the Drosophila hnRNP HRB98DE leads to skipping of all internal exons in the Drosophila dopa decarboxylase (Ddc) pre-mRNA in vivo. These results indicate that HRB98DE has a splicing activity that promotes use of terminal splice sites. The effect of excess HRB98DE on Ddc splicing is transient, even though high levels of HRB98DE persist for at least 24 hr. This suggests that Drosophila larvae can induce a compensating mechanism to counteract the effects of excess HRB98DE.

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Year:  1995        PMID: 7892184      PMCID: PMC42374          DOI: 10.1073/pnas.92.6.1822

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Recombinant hnRNP protein A1 and its N-terminal domain show preferential affinity for oligodeoxynucleotides homologous to intron/exon acceptor sites.

Authors:  M Buvoli; F Cobianchi; G Biamonti; S Riva
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

2.  Effect of 5' splice site mutations on splicing of the preceding intron.

Authors:  M Talerico; S M Berget
Journal:  Mol Cell Biol       Date:  1990-12       Impact factor: 4.272

3.  Renaturation of complementary DNA strands mediated by purified mammalian heterogeneous nuclear ribonucleoprotein A1 protein: implications for a mechanism for rapid molecular assembly.

Authors:  B W Pontius; P Berg
Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

4.  Control of alternative splicing by the differential binding of U1 small nuclear ribonucleoprotein particle.

Authors:  H C Kuo; F H Nasim; P J Grabowski
Journal:  Science       Date:  1991-03-01       Impact factor: 47.728

5.  Identification of nuclear proteins that specifically bind to RNAs containing 5' splice sites.

Authors:  D T Stolow; S M Berget
Journal:  Proc Natl Acad Sci U S A       Date:  1991-01-15       Impact factor: 11.205

6.  Exon definition may facilitate splice site selection in RNAs with multiple exons.

Authors:  B L Robberson; G J Cote; S M Berget
Journal:  Mol Cell Biol       Date:  1990-01       Impact factor: 4.272

7.  Crosslinking of hnRNP proteins to pre-mRNA requires U1 and U2 snRNPs.

Authors:  S H Mayrand; T Pederson
Journal:  Nucleic Acids Res       Date:  1990-06-11       Impact factor: 16.971

8.  Regulation of tissue-specific P-element pre-mRNA splicing requires the RNA-binding protein PSI.

Authors:  C W Siebel; R Kanaar; D C Rio
Journal:  Genes Dev       Date:  1994-07-15       Impact factor: 11.361

9.  Primary structures of the heterogeneous nuclear ribonucleoprotein A2, B1, and C2 proteins: a diversity of RNA binding proteins is generated by small peptide inserts.

Authors:  C G Burd; M S Swanson; M Görlach; G Dreyfuss
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

10.  RNA binding specificity of hnRNP proteins: a subset bind to the 3' end of introns.

Authors:  M S Swanson; G Dreyfuss
Journal:  EMBO J       Date:  1988-11       Impact factor: 11.598

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  13 in total

1.  The levels of the bancal product, a Drosophila homologue of vertebrate hnRNP K protein, affect cell proliferation and apoptosis in imaginal disc cells.

Authors:  B Charroux; C Angelats; L Fasano; S Kerridge; C Vola
Journal:  Mol Cell Biol       Date:  1999-11       Impact factor: 4.272

2.  Evidence for splice site pairing via intron definition in Schizosaccharomyces pombe.

Authors:  C M Romfo; C J Alvarez; W J van Heeckeren; C J Webb; J A Wise
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

3.  Distinct functions of the closely related tandem RNA-recognition motifs of hnRNP A1.

Authors:  A Mayeda; S H Munroe; R M Xu; A R Krainer
Journal:  RNA       Date:  1998-09       Impact factor: 4.942

4.  Retrotransposon insertion into the maize waxy gene results in tissue-specific RNA processing.

Authors:  S Marillonnet; S R Wessler
Journal:  Plant Cell       Date:  1997-06       Impact factor: 11.277

5.  Mutations in the hrp48 gene, which encodes a Drosophila heterogeneous nuclear ribonucleoprotein particle protein, cause lethality and developmental defects and affect P-element third-intron splicing in vivo.

Authors:  L E Hammond; D Z Rudner; R Kanaar; D C Rio
Journal:  Mol Cell Biol       Date:  1997-12       Impact factor: 4.272

6.  Altered levels of the Drosophila HRB87F/hrp36 hnRNP protein have limited effects on alternative splicing in vivo.

Authors:  K Zu; M L Sikes; S R Haynes; A L Beyer
Journal:  Mol Biol Cell       Date:  1996-07       Impact factor: 4.138

7.  Poly(ADP-ribose) glycohydrolase and poly(ADP-ribose)-interacting protein Hrp38 regulate pattern formation during Drosophila eye development.

Authors:  Yingbiao Ji; Michael Jarnik; Alexei V Tulin
Journal:  Gene       Date:  2013-05-25       Impact factor: 3.688

8.  Separable roles in vivo for the two RNA binding domains of Drosophila A1-hnRNP homolog.

Authors:  K Zu; M L Sikes; A L Beyer
Journal:  RNA       Date:  1998-12       Impact factor: 4.942

9.  Regulation of Ich-1 pre-mRNA alternative splicing and apoptosis by mammalian splicing factors.

Authors:  Z H Jiang; W J Zhang; Y Rao; J Y Wu
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-04       Impact factor: 11.205

10.  Genome-wide analysis of alternative pre-mRNA splicing and RNA-binding specificities of the Drosophila hnRNP A/B family members.

Authors:  Marco Blanchette; Richard E Green; Stewart MacArthur; Angela N Brooks; Steven E Brenner; Michael B Eisen; Donald C Rio
Journal:  Mol Cell       Date:  2009-02-27       Impact factor: 17.970

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