Literature DB >> 7877593

Physiological concentrations of purines and pyrimidines.

T W Traut1.   

Abstract

The concentrations of bases, nucleosides, and nucleosides mono-, di- and tri-phosphate are compared for about 600 published values. The data are predominantly from mammalian cells and fluids. For the most important ribonucleotides, average concentrations +/- SD (microM) are: ATP, 3,152 +/- 1,698; GTP, 468 +/- 224; UTP, 567 +/- 460 and CTP, 278 +/- 242. For deoxynucleosides-triphosphate (dNTP), the concentrations in dividing cells are: dATP, 24 +/- 22; dGTP, 5.2 +/- 4.5; dCTP, 29 +/- 19 and dTTP 37 +/- 30. By comparison, dUTP is usually about 0.2 microM. For the 4 dNTPs, tumor cells have concentrations of 6-11 fold over normal cells, and for the 4 NTPs, tumor cells also have concentrations 1.2-5 fold over the normal cells. By comparison, the concentrations of NTPs are significantly lower in various types of blood cells. The average concentration of bases and nucleosides in plasma and other extracellular fluids is generally in the range of 0.4-6 microM; these values are usually lower than corresponding intracellular concentrations. For phosphate compounds, average cellular concentrations are: Pi, 4400; ribose-1-P, 55; ribose-5-P, 70 and P-ribose-PP, 9.0. The metal ion magnesium, important for coordinating phosphates in nucleotides, has values (mM) of: free Mg2+, 1.1; complexed-Mg, 8.0. Consideration of experiments on the intracellular compartmentation of nucleotides shows support for this process between the cytoplasm and mitochondria, but not between the cytoplasm and the nucleus.

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Year:  1994        PMID: 7877593     DOI: 10.1007/bf00928361

Source DB:  PubMed          Journal:  Mol Cell Biochem        ISSN: 0300-8177            Impact factor:   3.396


  105 in total

1.  Simultaneous determination of myocardial nucleotides, nucleosides, purine bases and creatine phosphate by ion-pair high-performance liquid chromatography.

Authors:  W Fürst; S Hallström
Journal:  J Chromatogr       Date:  1992-07-01

2.  Analysis of purines.

Authors:  B B Fredholm
Journal:  Life Sci       Date:  1987-08-17       Impact factor: 5.037

3.  Intracellular activity of HPRT Cape Town: purine uptake and growth of cultured cells in selective media.

Authors:  L M Steyn; E H Harley
Journal:  J Inherit Metab Dis       Date:  1985       Impact factor: 4.982

4.  Detection of activities that interfere with the enzymatic assay of deoxyribonucleoside 5'-triphosphates.

Authors:  T W North; R K Bestwick; C K Mathews
Journal:  J Biol Chem       Date:  1980-07-25       Impact factor: 5.157

5.  Reverse phase partition HPLC for determination of plasma purines and pyrimidines in subjects with gout and renal failure.

Authors:  A McBurney; T Gibson
Journal:  Clin Chim Acta       Date:  1980-03-14       Impact factor: 3.786

6.  Deoxyuridine triphosphate pools after polyoma virus infection.

Authors:  S Nilsson; P Reichard; L Skoog
Journal:  J Biol Chem       Date:  1980-10-25       Impact factor: 5.157

7.  Orotidine accumulation in human erythrocytes during allopurinol therapy: association with high urinary oxypurinol-7-riboside concentrations in renal failure and in the Lesch-Nyhan syndrome.

Authors:  H A Simmonds; S Reiter; P M Davies; J S Cameron
Journal:  Clin Sci (Lond)       Date:  1991-03       Impact factor: 6.124

8.  Disturbances of cerebral purine and pyrimidine metabolism in young children with chronic renal failure.

Authors:  G P Gerrits; L A Monnens; R A De Abreu; C H Schröder; J M Trijbels; F J Gabreëls
Journal:  Nephron       Date:  1991       Impact factor: 2.847

9.  Facilitated transport of inosine and uridine in cultured mammalian cells is independent of nucleoside phosphorylases.

Authors:  P G Plagemann; R M Wohlhueter; J Erbe
Journal:  Biochim Biophys Acta       Date:  1981-01-22

10.  Plasma uridine changes in cancer patients treated with the combination of dipyridamole and N-phosphonacetyl-L-aspartate.

Authors:  T C Chan; M Markman; S Cleary; S B Howell
Journal:  Cancer Res       Date:  1986-06       Impact factor: 12.701

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  640 in total

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Authors:  Chia-Lun Tsai; David G Schatz
Journal:  EMBO J       Date:  2003-04-15       Impact factor: 11.598

2.  Primer-dependent synthesis by poliovirus RNA-dependent RNA polymerase (3D(pol)).

Authors:  V Rodriguez-Wells; S J Plotch; J J DeStefano
Journal:  Nucleic Acids Res       Date:  2001-07-01       Impact factor: 16.971

3.  Guanylyl cyclase is an ATP sensor coupling nitric oxide signaling to cell metabolism.

Authors:  I Ruiz-Stewart; S R Tiyyagura; J E Lin; S Kazerounian; G M Pitari; S Schulz; E Martin; F Murad; S A Waldman
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-18       Impact factor: 11.205

4.  Crystallization of Chlorella deoxyuridine triphosphatase.

Authors:  Laura Badalucco; Ishwari Poudel; Mamoru Yamanishi; Chandrasekhar Natarajan; Hideaki Moriyama
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-11-26

5.  Presteady state kinetic investigation of the incorporation of anti-hepatitis B nucleotide analogues catalyzed by noncanonical human DNA polymerases.

Authors:  Jessica A Brown; Lindsey R Pack; Jason D Fowler; Zucai Suo
Journal:  Chem Res Toxicol       Date:  2011-12-16       Impact factor: 3.739

6.  Transcriptional profile of GTP-mediated differentiation of C2C12 skeletal muscle cells.

Authors:  Rosa Mancinelli; Tiziana Pietrangelo; Geoffrey Burnstock; Giorgio Fanò; Stefania Fulle
Journal:  Purinergic Signal       Date:  2011-12-01       Impact factor: 3.765

Review 7.  Mechanistic cross-talk between DNA/RNA polymerase enzyme kinetics and nucleotide substrate availability in cells: Implications for polymerase inhibitor discovery.

Authors:  Si'Ana A Coggins; Bijan Mahboubi; Raymond F Schinazi; Baek Kim
Journal:  J Biol Chem       Date:  2020-07-31       Impact factor: 5.157

8.  Characterization of filament-forming CTP synthases from Arabidopsis thaliana.

Authors:  Manuel Daumann; Daniel Hickl; David Zimmer; Rachael A DeTar; Hans-Henning Kunz; Torsten Möhlmann
Journal:  Plant J       Date:  2018-08-31       Impact factor: 6.417

9.  Polymerase mu is a DNA-directed DNA/RNA polymerase.

Authors:  Stephanie A Nick McElhinny; Dale A Ramsden
Journal:  Mol Cell Biol       Date:  2003-04       Impact factor: 4.272

10.  Allosteric Regulation of Oligomerization by a B12 Trafficking G-Protein Is Corrupted in Methylmalonic Aciduria.

Authors:  Markus Ruetz; Gregory C Campanello; Liam McDevitt; Adam L Yokom; Pramod K Yadav; David Watkins; David S Rosenblatt; Melanie D Ohi; Daniel R Southworth; Ruma Banerjee
Journal:  Cell Chem Biol       Date:  2019-05-02       Impact factor: 8.116

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