Literature DB >> 7851763

The Neurospora transposon Tad is sensitive to repeat-induced point mutation (RIP).

J A Kinsey1, P W Garrett-Engele, E B Cambareri, E U Selker.   

Abstract

RIP (repeat-induced point mutation) efficiently mutates repeated sequences in the sexual phase of the Neurospora crassa life cycle. Nevertheless, an active LINE-like retrotransposon, Tad, was found in a N. crassa strain from Adiopodoumé. The possibility was tested that Tad might be resistant to RIP, or that the Adiopodoumé strain might be incompetent for RIP. Tad elements derived from the Adiopodoumé strain were found to be susceptible to RIP. In addition, strains lacking active Tad elements, including common laboratory strains and strains representing seven species of Neurospora, were found to have sequences closely related to Tad but with numerous mutations of the type resulting from RIP (G:C to A:T). Even the Adiopodoumé strain showed Tad-like elements with mutations characteristic of RIP. Results of crossing of an Adiopodoumé transformant with progeny of Adiopodoumé suggest that the Adiopodoumé strain is proficient at RIP. We conclude that Tad is an old transposable element that has been inactivated by RIP in most strains. Finding relics of RIP in both heterothallic and homothallic species of Neurospora implicates RIP across the genus.

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Year:  1994        PMID: 7851763      PMCID: PMC1206216     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  17 in total

1.  Site-specific methylation: effect on DNA modification methyltransferases and restriction endonucleases.

Authors:  M Nelson; M McClelland
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

2.  Repeat-induced G-C to A-T mutations in Neurospora.

Authors:  E B Cambareri; B C Jensen; E Schabtach; E U Selker
Journal:  Science       Date:  1989-06-30       Impact factor: 47.728

3.  Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia.

Authors:  R K Saiki; S Scharf; F Faloona; K B Mullis; G T Horn; H A Erlich; N Arnheim
Journal:  Science       Date:  1985-12-20       Impact factor: 47.728

4.  Rearrangement of duplicated DNA in specialized cells of Neurospora.

Authors:  E U Selker; E B Cambareri; B C Jensen; K R Haack
Journal:  Cell       Date:  1987-12-04       Impact factor: 41.582

5.  Transnuclear retrotransposition of the Tad element of Neurospora.

Authors:  J A Kinsey
Journal:  Proc Natl Acad Sci U S A       Date:  1993-10-15       Impact factor: 11.205

6.  "A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum.

Authors:  A P Feinberg; B Vogelstein
Journal:  Anal Biochem       Date:  1984-02       Impact factor: 3.365

Review 7.  Premeiotic instability of repeated sequences in Neurospora crassa.

Authors:  E U Selker
Journal:  Annu Rev Genet       Date:  1990       Impact factor: 16.830

8.  Efficient cloning of genes of Neurospora crassa.

Authors:  S J Vollmer; C Yanofsky
Journal:  Proc Natl Acad Sci U S A       Date:  1986-07       Impact factor: 11.205

9.  Specificity of repeat-induced point mutation (RIP) in Neurospora: sensitivity of non-Neurospora sequences, a natural diverged tandem duplication, and unique DNA adjacent to a duplicated region.

Authors:  E J Foss; P W Garrett; J A Kinsey; E U Selker
Journal:  Genetics       Date:  1991-04       Impact factor: 4.562

10.  Recurrence of repeat-induced point mutation (RIP) in Neurospora crassa.

Authors:  E B Cambareri; M J Singer; E U Selker
Journal:  Genetics       Date:  1991-04       Impact factor: 4.562

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  24 in total

1.  Recurrent locus-specific mutation resulting from a cryptic ectopic insertion in Neurospora.

Authors:  David D Perkins; Michael Freitag; Virginia C Pollard; Lori A Bailey-Shrode; Eric U Selker; Daniel J Ebbole
Journal:  Genetics       Date:  2007-02       Impact factor: 4.562

2.  Native DNA repeats and methylation in Ascobolus.

Authors:  C Goyon; J L Rossignol; G Faugeron
Journal:  Nucleic Acids Res       Date:  1996-09-01       Impact factor: 16.971

3.  Epigenetic control of a transposon-inactivated gene in Neurospora is dependent on DNA methylation.

Authors:  E B Cambareri; H M Foss; M R Rountree; E U Selker; J A Kinsey
Journal:  Genetics       Date:  1996-05       Impact factor: 4.562

4.  A new type of illegitimate recombination is dependent on restriction and homologous interaction.

Authors:  K Kusano; K Sakagami; T Yokochi; T Naito; Y Tokinaga; E Ueda; I Kobayashi
Journal:  J Bacteriol       Date:  1997-09       Impact factor: 3.490

5.  Genetic recombination through double-strand break repair: shift from two-progeny mode to one-progeny mode by heterologous inserts.

Authors:  N K Takahashi; K Sakagami; K Kusano; K Yamamoto; H Yoshikura; I Kobayashi
Journal:  Genetics       Date:  1997-05       Impact factor: 4.562

6.  Cytosine methylation associated with repeat-induced point mutation causes epigenetic gene silencing in Neurospora crassa.

Authors:  J T Irelan; E U Selker
Journal:  Genetics       Date:  1997-06       Impact factor: 4.562

7.  Structure of the chromosome VII centromere region in Neurospora crassa: degenerate transposons and simple repeats.

Authors:  E B Cambareri; R Aisner; J Carbon
Journal:  Mol Cell Biol       Date:  1998-09       Impact factor: 4.272

Review 8.  Lessons from the genome sequence of Neurospora crassa: tracing the path from genomic blueprint to multicellular organism.

Authors:  Katherine A Borkovich; Lisa A Alex; Oded Yarden; Michael Freitag; Gloria E Turner; Nick D Read; Stephan Seiler; Deborah Bell-Pedersen; John Paietta; Nora Plesofsky; Michael Plamann; Marta Goodrich-Tanrikulu; Ulrich Schulte; Gertrud Mannhaupt; Frank E Nargang; Alan Radford; Claude Selitrennikoff; James E Galagan; Jay C Dunlap; Jennifer J Loros; David Catcheside; Hirokazu Inoue; Rodolfo Aramayo; Michael Polymenis; Eric U Selker; Matthew S Sachs; George A Marzluf; Ian Paulsen; Rowland Davis; Daniel J Ebbole; Alex Zelter; Eric R Kalkman; Rebecca O'Rourke; Frederick Bowring; Jane Yeadon; Chizu Ishii; Keiichiro Suzuki; Wataru Sakai; Robert Pratt
Journal:  Microbiol Mol Biol Rev       Date:  2004-03       Impact factor: 11.056

9.  Genetic analysis of wild-isolated Neurospora crassa strains identified as dominant suppressors of repeat-induced point mutation.

Authors:  Ashwin Bhat; Felicite K Noubissi; Meenal Vyas; Durgadas P Kasbekar
Journal:  Genetics       Date:  2003-07       Impact factor: 4.562

10.  SnoRNAs from the filamentous fungus Neurospora crassa: structural, functional and evolutionary insights.

Authors:  Na Liu; Zhen-Dong Xiao; Chun-Hong Yu; Peng Shao; Yin-Tong Liang; Dao-Gang Guan; Jian-Hua Yang; Chun-Long Chen; Liang-Hu Qu; Hui Zhou
Journal:  BMC Genomics       Date:  2009-11-08       Impact factor: 3.969

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