Literature DB >> 7851733

The use of arbitrarily primed PCR (AP-PCR) to develop taxa specific DNA probes of known sequence.

A J Martínez-Murcia1, F Rodríguez-Valera.   

Abstract

A rapid polymerase chain reaction (PCR) method to obtain taxa-specific DNA probes has been developed. The oligonucleotide probes derived from the sequences of species-specific (or other taxa) random amplified polymorphic DNA (RAPD) fragments. The methodology was applied to design probes for the halophilic archaeal species Haloferax mediterranei. With this technique, DNA probes of known sequence can be generated easily and without any previous knowledge about the properties of the microorganisms.

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Year:  1994        PMID: 7851733     DOI: 10.1111/j.1574-6968.1994.tb07295.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  7 in total

1.  Osmotic stress-induced genetic rearrangements in Escherichia coli H10407 detected by randomly amplified polymorphic DNA analysis.

Authors:  A Jolivet-Gougeon; S David-Jobert; Z Tamanai-Shacoori; C Ménard; M Cormier
Journal:  Appl Environ Microbiol       Date:  2000-12       Impact factor: 4.792

2.  PCR-DNA probe assays for identification and detection of Prevotella intermedia sensu stricto and Prevotella nigrescens.

Authors:  E Guillot; C Mouton
Journal:  J Clin Microbiol       Date:  1997-07       Impact factor: 5.948

3.  Mycobacterium malmoense-specific nested PCR based on a conserved sequence detected in random amplified polymorphic DNA fingerprints.

Authors:  J Kauppinen; R Mäntyjärvi; M L Katila
Journal:  J Clin Microbiol       Date:  1999-05       Impact factor: 5.948

4.  Rapid identification of pathogenic Leptospira species (Leptospira interrogans, L. borgpetersenii, and L. kirschneri) with species-specific DNA probes produced by arbitrarily primed PCR.

Authors:  M Letocart; G Baranton; P Perolat
Journal:  J Clin Microbiol       Date:  1997-01       Impact factor: 5.948

5.  Intraspecific genetic diversity of Oenococcus oeni as derived from DNA fingerprinting and sequence analyses.

Authors:  A I Zavaleta; A J Martínez-Murcia; F Rodríguez-Valera
Journal:  Appl Environ Microbiol       Date:  1997-04       Impact factor: 4.792

6.  Evidence from phylogenetic and genome fingerprinting analyses suggests rapidly changing variation in Halorubrum and Haloarcula populations.

Authors:  Nikhil Ram Mohan; Matthew S Fullmer; Andrea M Makkay; Ryan Wheeler; Antonio Ventosa; Adit Naor; J Peter Gogarten; R Thane Papke
Journal:  Front Microbiol       Date:  2014-04-09       Impact factor: 5.640

7.  Prognostic value of genomic damage in non-small-cell lung cancer.

Authors:  C de Juan; P Iniesta; F J Vega; M A Peinado; C Fernandez; T Caldés; M J Massa; J A López; A Sánchez; A J Torres; J L Balibrea; M Benito
Journal:  Br J Cancer       Date:  1998-06       Impact factor: 7.640

  7 in total

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