Literature DB >> 7821789

Construction of a human full-length cDNA bank.

S Kato1, S Sekine, S W Oh, N S Kim, Y Umezawa, N Abe, M Yokoyama-Kobayashi, T Aoki.   

Abstract

We aimed to construct a full-length cDNA bank from an entire set of human genes and to analyze the function of a protein encoded by each cDNA. To achieve this purpose, a multifunctional phagemid shuttle vector, pKA1, was constructed for preparing a high-quality cDNA library composed of full-length cDNA clones which can be sequenced and expressed in vitro and in mammalian cells without subcloning the cDNA fragment into other vectors. Using this as a vector primer, we have prepared a prototype of the bank composed of full-length cDNAs encoding 236 human proteins whose amino acid sequences are identical or similar to known proteins. Most cDNAs contain a putative cap site sequence, some of which show a pyrimidine-rich conserved sequence exhibiting polymorphism. It was confirmed that the vector permits efficient in vitro translation, expression in mammalian cells and the preparation of nested deletion mutants.

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Year:  1994        PMID: 7821789     DOI: 10.1016/0378-1119(94)90433-2

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  24 in total

1.  Messenger RNA translation state: the second dimension of high-throughput expression screening.

Authors:  Q Zong; M Schummer; L Hood; D R Morris
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-14       Impact factor: 11.205

2.  Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

Authors:  P Carninci; Y Shibata; N Hayatsu; Y Sugahara; K Shibata; M Itoh; H Konno; Y Okazaki; M Muramatsu; Y Hayashizaki
Journal:  Genome Res       Date:  2000-10       Impact factor: 9.043

3.  Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins.

Authors:  T Ito; K Tashiro; S Muta; R Ozawa; T Chiba; M Nishizawa; K Yamamoto; S Kuhara; Y Sakaki
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-01       Impact factor: 11.205

4.  Global amplification of cDNA from limiting amounts of tissue. An improved method for gene cloning and analysis.

Authors:  M K Reddy; Suresh Nair; S K Sopory
Journal:  Mol Biotechnol       Date:  2002-11       Impact factor: 2.695

5.  Transcriptome analysis of human gastric cancer.

Authors:  Jung-Hwa Oh; Jin Ok Yang; Yoonsoo Hahn; Mi-Rang Kim; Sang-Soon Byun; Yeo-Jin Jeon; Jeong-Min Kim; Kyu-Sang Song; Seung-Moo Noh; Sangsoo Kim; Hyang-Sook Yoo; Yong Sung Kim; Nam-Soon Kim
Journal:  Mamm Genome       Date:  2005-12-08       Impact factor: 2.957

6.  The host gene for intronic U17 small nucleolar RNAs in mammals has no protein-coding potential and is a member of the 5'-terminal oligopyrimidine gene family.

Authors:  P Pelczar; W Filipowicz
Journal:  Mol Cell Biol       Date:  1998-08       Impact factor: 4.272

7.  Identification of genes expressed in human CD34(+) hematopoietic stem/progenitor cells by expressed sequence tags and efficient full-length cDNA cloning.

Authors:  M Mao; G Fu; J S Wu; Q H Zhang; J Zhou; L X Kan; Q H Huang; K L He; B W Gu; Z G Han; Y Shen; J Gu; Y P Yu; S H Xu; Y X Wang; S J Chen; Z Chen
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-07       Impact factor: 11.205

8.  Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5'-terminal oligopyrimidine gene family reveals common features of snoRNA host genes.

Authors:  C M Smith; J A Steitz
Journal:  Mol Cell Biol       Date:  1998-12       Impact factor: 4.272

9.  Overexpression of p28/gankyrin in human hepatocellular carcinoma and its clinical significance.

Authors:  Xiao-Yong Fu; Hong-Yang Wang; Lu Tan; Shu-Qin Liu; Hui-Fang Cao; Meng-Chao Wu
Journal:  World J Gastroenterol       Date:  2002-08       Impact factor: 5.742

10.  Simple cDNA normalization using kamchatka crab duplex-specific nuclease.

Authors:  Pavel A Zhulidov; Ekaterina A Bogdanova; Alex S Shcheglov; Laura L Vagner; George L Khaspekov; Valery B Kozhemyako; Mikhail V Matz; Ella Meleshkevitch; Leonid L Moroz; Sergey A Lukyanov; Dmitry A Shagin
Journal:  Nucleic Acids Res       Date:  2004-02-18       Impact factor: 16.971

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