Literature DB >> 7816610

Splicing factor SF3a60 is the mammalian homologue of PRP9 of S.cerevisiae: the conserved zinc finger-like motif is functionally exchangeable in vivo.

A Krämer1, P Legrain, F Mulhauser, K Gröning, R Brosi, G Bilbe.   

Abstract

A cDNA encoding the 60 kDa subunit of mammalian splicing factor SF3a has been isolated. The deduced protein sequence reveals a 30% identity to the PRP9 splicing protein of the yeast S.cerevisiae. The highest homology is present in a zinc finger-like region in the C-terminal domain of both proteins. The PRP9 zinc finger-like motif has been replaced by the equivalent region of mammalian SF3a60. The chimeric protein rescues the temperature-sensitive phenotype of the prp9-1 mutant strain demonstrating that not only the structure but also the function of this domain has been conserved during evolution.

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Year:  1994        PMID: 7816610      PMCID: PMC332064          DOI: 10.1093/nar/22.24.5223

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  38 in total

1.  Immunoaffinity purification of a [U4/U6.U5] tri-snRNP from human cells.

Authors:  S E Behrens; R Lührmann
Journal:  Genes Dev       Date:  1991-08       Impact factor: 11.361

2.  Primary structure of the human splicing factor ASF reveals similarities with Drosophila regulators.

Authors:  H Ge; P Zuo; J L Manley
Journal:  Cell       Date:  1991-07-26       Impact factor: 41.582

Review 3.  Structure of spliceosomal snRNPs and their role in pre-mRNA splicing.

Authors:  R Lührmann; B Kastner; M Bach
Journal:  Biochim Biophys Acta       Date:  1990-11-30

4.  Identification, purification, and biochemical characterization of U2 small nuclear ribonucleoprotein auxiliary factor.

Authors:  P D Zamore; M R Green
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

5.  RNA11 protein is associated with the yeast spliceosome and is localized in the periphery of the cell nucleus.

Authors:  T H Chang; M W Clark; A J Lustig; M E Cusick; J Abelson
Journal:  Mol Cell Biol       Date:  1988-06       Impact factor: 4.272

6.  The yeast PRP6 gene encodes a U4/U6 small nuclear ribonucleoprotein particle (snRNP) protein, and the PRP9 gene encodes a protein required for U2 snRNP binding.

Authors:  N Abovich; P Legrain; M Rosbash
Journal:  Mol Cell Biol       Date:  1990-12       Impact factor: 4.272

7.  Human U1 snRNP-specific C protein: complete cDNA and protein sequence and identification of a multigene family in mammals.

Authors:  P T Sillekens; R P Beijer; W J Habets; W J van Venrooij
Journal:  Nucleic Acids Res       Date:  1988-09-12       Impact factor: 16.971

8.  The molecular characterization of PRP6 and PRP9 yeast genes reveals a new cysteine/histidine motif common to several splicing factors.

Authors:  P Legrain; A Choulika
Journal:  EMBO J       Date:  1990-09       Impact factor: 11.598

9.  A novel splicing factor is an integral component of 200S large nuclear ribonucleoprotein (InRNP) particles.

Authors:  G Ast; D Goldblatt; D Offen; J Sperling; R Sperling
Journal:  EMBO J       Date:  1991-02       Impact factor: 11.598

10.  A novel gene, spp91-1, suppresses the splicing defect and the pre-mRNA nuclear export in the prp9-1 mutant.

Authors:  C Chapon; P Legrain
Journal:  EMBO J       Date:  1992-09       Impact factor: 11.598

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  17 in total

1.  Functional analysis of the human CDC5L complex and identification of its components by mass spectrometry.

Authors:  P Ajuh; B Kuster; K Panov; J C Zomerdijk; M Mann; A I Lamond
Journal:  EMBO J       Date:  2000-12-01       Impact factor: 11.598

2.  Domains in human splicing factors SF3a60 and SF3a66 required for binding to SF3a120, assembly of the 17S U2 snRNP, and prespliceosome formation.

Authors:  D Nesic; A Krämer
Journal:  Mol Cell Biol       Date:  2001-10       Impact factor: 4.272

3.  Mutation in the prp12+ gene encoding a homolog of SAP130/SF3b130 causes differential inhibition of pre-mRNA splicing and arrest of cell-cycle progression in Schizosaccharomyces pombe.

Authors:  Y Habara; S Urushiyama; T Shibuya; Y Ohshima; T Tani
Journal:  RNA       Date:  2001-05       Impact factor: 4.942

4.  Structure and assembly of the SF3a splicing factor complex of U2 snRNP.

Authors:  Pei-Chun Lin; Rui-Ming Xu
Journal:  EMBO J       Date:  2012-02-07       Impact factor: 11.598

5.  Interaction domains and nuclear targeting signals in subunits of the U2 small nuclear ribonucleoprotein particle-associated splicing factor SF3a.

Authors:  Ching-Jung Huang; Fabio Ferfoglia; Flore Raleff; Angela Krämer
Journal:  J Biol Chem       Date:  2011-02-24       Impact factor: 5.157

6.  In vivo commitment to splicing in yeast involves the nucleotide upstream from the branch site conserved sequence and the Mud2 protein.

Authors:  J C Rain; P Legrain
Journal:  EMBO J       Date:  1997-04-01       Impact factor: 11.598

7.  Identification of novel genes required for yeast pre-mRNA splicing by means of cold-sensitive mutations.

Authors:  S M Noble; C Guthrie
Journal:  Genetics       Date:  1996-05       Impact factor: 4.562

8.  Functional analysis of the fission yeast Prp4 protein kinase involved in pre-mRNA splicing and isolation of a putative mammalian homologue.

Authors:  T Gross; M Lützelberger; H Weigmann; A Klingenhoff; S Shenoy; N F Käufer
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

9.  PRPF mutations are associated with generalized defects in spliceosome formation and pre-mRNA splicing in patients with retinitis pigmentosa.

Authors:  Goranka Tanackovic; Adriana Ransijn; Philippe Thibault; Sherif Abou Elela; Roscoe Klinck; Eliot L Berson; Benoit Chabot; Carlo Rivolta
Journal:  Hum Mol Genet       Date:  2011-03-05       Impact factor: 6.150

10.  CUS2, a yeast homolog of human Tat-SF1, rescues function of misfolded U2 through an unusual RNA recognition motif.

Authors:  D Yan; R Perriman; H Igel; K J Howe; M Neville; M Ares
Journal:  Mol Cell Biol       Date:  1998-09       Impact factor: 4.272

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