Literature DB >> 7813443

Assembly and disassembly of spliceosomes along a specific pre-messenger RNP fiber.

E Kiseleva1, T Wurtz, N Visa, B Daneholt.   

Abstract

Transcriptionally active Balbiani ring (BR) genes in the salivary glands of the dipteran Chironomus tentans were studied by immunoelectron microscopy to establish the distribution of spliceosome components along a specific pre-messenger ribonucleoprotein (pre-mRNP) fiber. The BR genes are 35-40 kb in size with three introns close to the 5' end and one close to the 3' end; a very large middle portion lacks introns. As a rule the 5' introns are spliced concomitant with transcription in the promoter proximal third of the gene, while the 3' intron is spliced post-transcriptionally. The BR genes with growing pre-mRNPs were visualized in situ, while completed and released pre-mRNPs were isolated from the nucleoplasm and studied unfolded on a grid surface. An anti-snRNP antibody (Y12) bound mainly to the promoter proximal third of the BR gene (86%) and only to a minor extent to the middle and distal thirds (7 and 7% respectively). An antibody to an hnRNP protein reacted with the proximal, middle and distal regions to an increasing extent (17, 38 and 45% respectively), reflecting the increase in size of the growing transcription product. In the nucleoplasmic pre-mRNP particle only one end of the RNP fiber was labeled by Y 12, presumably the 3' end; the anti-hnRNP antibody decorated the entire RNP fiber. Thus, the snRNPs do not associate along the whole pre-mRNP fiber but rather bind to the 5' and 3' ends, i.e. the regions containing the introns. The results also imply that the spliceosomes both assemble and disassemble rapidly on the pre-mRNP fiber.

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Year:  1994        PMID: 7813443      PMCID: PMC395583          DOI: 10.1002/j.1460-2075.1994.tb06952.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  48 in total

1.  Splicing takes a holliday.

Authors:  J A Steitz
Journal:  Science       Date:  1992-08-14       Impact factor: 47.728

2.  A glimpse into the spliceosome.

Authors:  A I Lamond
Journal:  Curr Biol       Date:  1993-01       Impact factor: 10.834

3.  Isolation and initial characterization of a specific premessenger ribonucleoprotein particle.

Authors:  T Wurtz; A Lönnroth; L Ovchinnikov; U Skoglund; B Daneholt
Journal:  Proc Natl Acad Sci U S A       Date:  1990-01       Impact factor: 11.205

Review 4.  Structure of spliceosomal snRNPs and their role in pre-mRNA splicing.

Authors:  R Lührmann; B Kastner; M Bach
Journal:  Biochim Biophys Acta       Date:  1990-11-30

5.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

6.  RNP particles at splice junction sequences on Drosophila chorion transcripts.

Authors:  Y N Osheim; O L Miller; A L Beyer
Journal:  Cell       Date:  1985-11       Impact factor: 41.582

7.  Activation of Balbiani ring genes in Chironomus tentans after a pilocarpine-induced depletion of the secretory products from the salivary gland lumen.

Authors:  R Mähr; B Meyer; B Daneholt; H M Eppenberger
Journal:  Dev Biol       Date:  1980-12       Impact factor: 3.582

Review 8.  The Balbiani ring multigene family: coding repetitive sequences and evolution of a tissue-specific cell function.

Authors:  L Wieslander
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1994

9.  Small nuclear ribonucleoproteins and heterogeneous nuclear ribonucleoproteins in the amphibian germinal vesicle: loops, spheres, and snurposomes.

Authors:  Z A Wu; C Murphy; H G Callan; J G Gall
Journal:  J Cell Biol       Date:  1991-05       Impact factor: 10.539

10.  Association of individual hnRNP proteins and snRNPs with nascent transcripts.

Authors:  E L Matunis; M J Matunis; G Dreyfuss
Journal:  J Cell Biol       Date:  1993-04       Impact factor: 10.539

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  30 in total

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Authors:  B Daneholt
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-19       Impact factor: 11.205

2.  In situ transcription and splicing in the Balbiani ring 3 gene.

Authors:  I Wetterberg; J Zhao; S Masich; L Wieslander; U Skoglund
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3.  A novel conserved RNA-binding domain protein, RBD-1, is essential for ribosome biogenesis.

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4.  An actin-ribonucleoprotein interaction is involved in transcription by RNA polymerase II.

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-12       Impact factor: 11.205

5.  Cotranscriptional recruitment of the U1 snRNP to intron-containing genes in yeast.

Authors:  Kimberly M Kotovic; Daniel Lockshon; Lamia Boric; Karla M Neugebauer
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

6.  Nascent-seq indicates widespread cotranscriptional pre-mRNA splicing in Drosophila.

Authors:  Yevgenia L Khodor; Joseph Rodriguez; Katharine C Abruzzi; Chih-Hang Anthony Tang; Michael T Marr; Michael Rosbash
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7.  Total RNA sequencing reveals nascent transcription and widespread co-transcriptional splicing in the human brain.

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Journal:  Nat Struct Mol Biol       Date:  2011-11-06       Impact factor: 15.369

8.  Conspicuous accumulation of transcription elongation repressor hrp130/CA150 on the intron-rich Balbiani ring 3 gene.

Authors:  Xin Sun; Jian Zhao; Karin Kylberg; Teresa Soop; Kevin Palka; Erik Sonnhammer; Neus Visa; Alla T Alzhanova-Ericsson; Bertil Daneholt
Journal:  Chromosoma       Date:  2004-10-06       Impact factor: 4.316

9.  Chironomus tentans-repressor splicing factor represses SR protein function locally on pre-mRNA exons and is displaced at correct splice sites.

Authors:  Petra Björk; Ingela Wetterberg-Strandh; Göran Baurén; Lars Wieslander
Journal:  Mol Biol Cell       Date:  2005-10-19       Impact factor: 4.138

10.  Functional coupling of RNAP II transcription to spliceosome assembly.

Authors:  Rita Das; Kobina Dufu; Ben Romney; Megan Feldt; Mark Elenko; Robin Reed
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