Literature DB >> 7775423

Overproduction and one-step purification of Escherichia coli 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase and oxygen transfer studies during catalysis using isotopic-shifted heteronuclear NMR.

G D Dotson1, R K Dua, J C Clemens, E W Wooten, R W Woodard.   

Abstract

The enzyme 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase catalyzes the condensation of D-arabinose 5-phosphate with phosphoenolpyruvate to give the unique 8-carbon acidic sugar 3-deoxy-D-manno-octulosonic acid 8-phosphate (KDO 8-P) found only in Gram-negative bacteria and required for lipid A maturation and cellular growth. The Escherichia coli gene kdsA that encodes KDO 8-P synthase has been amplified by polymerase chain reaction methodologies and subcloned into the expression vector, pT7-7. A simple one-step purification yields 200 mg of homogeneous KDO 8-P synthase per liter of cell culture. [2-13C,18O]Phosphoenolpyruvate (PEP) was prepared by first, exchange of [2-13C]-3-bromopyruvate with 2H2 18O followed by reaction of the labeled bromopyruvate with trimethylphosphite. The fate of the enolic oxygen in this multilabeled PEP, during the course of the KDO 8-P synthase-catalyzed reaction with D-arabinose 5-phosphate, was monitored by 13C and 31P NMR spectroscopy. The inorganic phosphate formed during the reaction was further analyzed via mass spectral analysis of its trimethyl ester derivative. The 13C NMR spectrum of an incubation mixture of [2-13C]PEP and D-arabinose 5-phosphate in 2H2 18O in the presence of KDO 8-P synthase was also recorded. [2-13C]KDO 8-P was utilized to determine the extent of nonenzymatic incorporation of 18O into the C-2 position of KDO 8-P. The results indicate that the enolic oxygen of the PEP is recovered with the inorganic phosphate, and the C-2 oxygen of KDO 8-P originates from the solvent, H2O.

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Year:  1995        PMID: 7775423     DOI: 10.1074/jbc.270.23.13698

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  10 in total

1.  The catalytic and conformational cycle of Aquifex aeolicus KDO8P synthase: role of the L7 loop.

Authors:  Xingjue Xu; Fathima Kona; Jian Wang; Jinshuang Lu; Timothy Stemmler; Domenico L Gatti
Journal:  Biochemistry       Date:  2005-09-20       Impact factor: 3.162

2.  In vitro characterization of LmbK and LmbO: identification of GDP-D-erythro-α-D-gluco-octose as a key intermediate in lincomycin A biosynthesis.

Authors:  Chia-I Lin; Eita Sasaki; Aoshu Zhong; Hung-wen Liu
Journal:  J Am Chem Soc       Date:  2014-01-10       Impact factor: 15.419

3.  Common basis for the mechanism of metallo and non-metallo KDO8P synthases.

Authors:  Peng Tao; H Bernhard Schlegel; Domenico L Gatti
Journal:  J Inorg Biochem       Date:  2010-08-19       Impact factor: 4.155

4.  Substrate ambiguity of 3-deoxy-D-manno-octulosonate 8-phosphate synthase from Neisseria gonorrhoeae in the context of its membership in a protein family containing a subset of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthases.

Authors:  P S Subramaniam; G Xie; T Xia; R A Jensen
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

5.  Functional and biochemical characterization of a recombinant Arabidopsis thaliana 3-deoxy-D-manno-octulosonate 8-phosphate synthase.

Authors:  Jing Wu; Mayur A Patel; Appavu K Sundaram; Ronald W Woodard
Journal:  Biochem J       Date:  2004-07-01       Impact factor: 3.857

6.  Characterization and kinetics of phosphopantothenoylcysteine synthetase from Enterococcus faecalis.

Authors:  Jiangwei Yao; James D Patrone; Garry D Dotson
Journal:  Biochemistry       Date:  2009-03-31       Impact factor: 3.162

7.  Dephosphorylation and biodistribution of 1-¹³C-phospholactate in vivo.

Authors:  Roman V Shchepin; Wellington Pham; Eduard Y Chekmenev
Journal:  J Labelled Comp Radiopharm       Date:  2014-07-03       Impact factor: 1.921

8.  Cloning, expression, and biochemical characterization of 3-deoxy-D-manno-2-octulosonate-8-phosphate (KDO8P) synthase from the hyperthermophilic bacterium Aquifex pyrophilus.

Authors:  Smadar Shulami; Orit Yaniv; Emilia Rabkin; Yuval Shoham; Timor Baasov
Journal:  Extremophiles       Date:  2003-08-29       Impact factor: 2.395

9.  Evaluation of Azido 3-Deoxy-d-manno-oct-2-ulosonic Acid (Kdo) Analogues for Click Chemistry-Mediated Metabolic Labeling of Myxococcus xanthus DZ2 Lipopolysaccharide.

Authors:  Fares Saïdi; Oscar Javier Gamboa Marin; José Ignacio Veytia-Bucheli; Evgeny Vinogradov; Gokulakrishnan Ravicoularamin; Nicolas Y Jolivet; Ahmad A Kezzo; Eric Ramirez Esquivel; Adyasha Panda; Gaurav Sharma; Stéphane P Vincent; Charles Gauthier; Salim T Islam
Journal:  ACS Omega       Date:  2022-09-23

10.  Parahydrogen induced polarization of 1-(13)C-phospholactate-d(2) for biomedical imaging with >30,000,000-fold NMR signal enhancement in water.

Authors:  Roman V Shchepin; Aaron M Coffey; Kevin W Waddell; Eduard Y Chekmenev
Journal:  Anal Chem       Date:  2014-04-16       Impact factor: 6.986

  10 in total

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