Literature DB >> 7773179

A comparison of X-ray and NMR structures for human endothelin-1.

B A Wallace1, R W Janes, D A Bassolino, S R Krystek.   

Abstract

Direct comparisons between the recently solved X-ray and NMR structures of human endothelin-1 with respect to secondary structure, RMS deviations, surface accessibilities, and side-chain conformers indicate important differences in conformation, especially in the C-terminus, but also in the central loop region, that are important for defining the specificity of binding. These differences are larger than seen for other X-ray and NMR structures that have been compared. Comparisons between the X-ray structure and the NMR NOE constraints highlight the regions of flexibility and environment-induced diversity in the endothelin structures.

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Year:  1995        PMID: 7773179      PMCID: PMC2142965          DOI: 10.1002/pro.5560040110

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  17 in total

1.  Definition of general topological equivalence in protein structures. A procedure involving comparison of properties and relationships through simulated annealing and dynamic programming.

Authors:  A Sali; T L Blundell
Journal:  J Mol Biol       Date:  1990-03-20       Impact factor: 5.469

2.  Three-dimensional structure of proteins determined by molecular dynamics with interproton distance restraints: application to crambin.

Authors:  A T Brünger; G M Clore; A M Gronenborn; M Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  1986-06       Impact factor: 11.205

Review 3.  The structure and specificity of endothelin receptors: their importance in physiology and medicine.

Authors:  J P Huggins; J T Pelton; R C Miller
Journal:  Pharmacol Ther       Date:  1993       Impact factor: 12.310

4.  Comparison of four independently determined structures of human recombinant interleukin-4.

Authors:  L J Smith; C Redfield; R A Smith; C M Dobson; G M Clore; A M Gronenborn; M R Walter; T L Naganbushan; A Wlodawer
Journal:  Nat Struct Biol       Date:  1994-05

5.  Solution conformation of endothelin determined by means of 1H-NMR spectroscopy and distance geometry calculations.

Authors:  H Tamaoki; Y Kobayashi; S Nishimura; T Ohkubo; Y Kyogoku; K Nakajima; S Kumagaye; T Kimura; S Sakakibara
Journal:  Protein Eng       Date:  1991-06

6.  Conformational isomerism of endothelin in acidic aqueous media: a quantitative NOESY analysis.

Authors:  N H Andersen; C P Chen; T M Marschner; S R Krystek; D A Bassolino
Journal:  Biochemistry       Date:  1992-02-11       Impact factor: 3.162

7.  Solution conformation of endothelin-1 by 1H NMR, CD, and molecular modeling.

Authors:  V Saudek; J Hoflack; J T Pelton
Journal:  Int J Pept Protein Res       Date:  1991-03

8.  1H-NMR study of endothelin, sequence-specific assignment of the spectrum and a solution structure.

Authors:  V Saudek; J Hoflack; J T Pelton
Journal:  FEBS Lett       Date:  1989-10-23       Impact factor: 4.124

9.  Solution conformation of endothelin determined by nuclear magnetic resonance and distance geometry.

Authors:  S Endo; H Inooka; Y Ishibashi; C Kitada; E Mizuta; M Fujino
Journal:  FEBS Lett       Date:  1989-10-23       Impact factor: 4.124

10.  Solution conformation of endothelin, a potent vaso-constricting bicyclic peptide. A combined use of 1H NMR spectroscopy and distance geometry calculations.

Authors:  S Munro; D Craik; C McConville; J Hall; M Searle; W Bicknell; D Scanlon; C Chandler
Journal:  FEBS Lett       Date:  1991-01-14       Impact factor: 4.124

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  3 in total

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Authors:  A J Orry; B A Wallace
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

2.  Frequent loss of endothelin-3 (EDN3) expression due to epigenetic inactivation in human breast cancer.

Authors:  Frank Wiesmann; Jürgen Veeck; Oliver Galm; Arndt Hartmann; Manel Esteller; Ruth Knüchel; Edgar Dahl
Journal:  Breast Cancer Res       Date:  2009-06-15       Impact factor: 6.466

3.  Estimation of Uncertainties in the Global Distance Test (GDT_TS) for CASP Models.

Authors:  Wenlin Li; R Dustin Schaeffer; Zbyszek Otwinowski; Nick V Grishin
Journal:  PLoS One       Date:  2016-05-05       Impact factor: 3.240

  3 in total

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