Literature DB >> 7765840

Evolution of chlorocatechol catabolic pathways. Conclusions to be drawn from comparisons of lactone hydrolases.

M Schlömann1.   

Abstract

The aerobic bacterial degradation of chloroaromatic compounds often involves chlorosubstituted catechols as central intermediates. They are converted to 3-oxoadipate in a series of reactions similar to that for catechol catabolism and therefore designated as modified ortho-cleavage pathway. Among the enzymes of this catabolic route, the chlorocatechol 1,2-dioxygenases are known to have a relaxed substrate specificity. In contrast, several chloromuconate cycloisomerases are more specific, and the dienelactone hydrolases of chlorocatechol catabolic pathways do not even convert the corresponding intermediate of catechol degradation, 3-oxoadipate enol-lactone. While the sequences of chlorocatechol 1,2-dioxygenases and chloromuconate cycloisomerases are very similar to those of catechol 1,2-dioxygenases and muconate cycloisomerases, respectively, the relationship between dienelactone hydrolases and 3-oxoadipate enol-lactone hydrolases is more distant. They seem to share an alpha/beta hydrolase fold, but the sequences comprising the fold are quite dissimilar. Therefore, for chlorocatechol catabolism, dienelactone hydrolases might have been recruited from some other, preexisting pathway. Their relationship to dienelactone (hydrolases identified in 4-fluorobenzoate utilizing strains of Alcaligenes and Burkholderia (Pseudomonas) cepacia is investigated). Sequence evidence suggests that the chlorocatechol catabolic operons of the plasmids pJP4, pAC27, and pP51 have been derived from a common precursor. The latter seems to have evolved for the purpose of halocatechol catabolism, and may be considerably older than the chemical industry.

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Year:  1994        PMID: 7765840     DOI: 10.1007/BF00696467

Source DB:  PubMed          Journal:  Biodegradation        ISSN: 0923-9820            Impact factor:   3.909


  132 in total

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Journal:  Nature       Date:  1988-09-08       Impact factor: 49.962

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Authors:  M Schlömann; E Schmidt; H J Knackmuss
Journal:  J Bacteriol       Date:  1990-09       Impact factor: 3.490

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Authors:  T Miyata; T Yasunaga; T Nishida
Journal:  Proc Natl Acad Sci U S A       Date:  1980-12       Impact factor: 11.205

6.  Sequence analysis of the Pseudomonas sp. strain P51 tcb gene cluster, which encodes metabolism of chlorinated catechols: evidence for specialization of catechol 1,2-dioxygenases for chlorinated substrates.

Authors:  J R van der Meer; R I Eggen; A J Zehnder; W M de Vos
Journal:  J Bacteriol       Date:  1991-04       Impact factor: 3.490

7.  Refined structure of dienelactone hydrolase at 1.8 A.

Authors:  D Pathak; D Ollis
Journal:  J Mol Biol       Date:  1990-07-20       Impact factor: 5.469

8.  Nucleotide sequence and expression of clcD, a plasmid-borne dienelactone hydrolase gene from Pseudomonas sp. strain B13.

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Journal:  J Bacteriol       Date:  1987-02       Impact factor: 3.490

9.  Chemical structure and biodegradability of halogenated aromatic compounds. Substituent effects on dehydrogenation of 3,5-cyclohexadiene-1,2-diol-1-carboxylic acid.

Authors:  W Reineke; H J Knackmuss
Journal:  Biochim Biophys Acta       Date:  1978-09-06

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Authors:  W C Evans; B S Smith; P Moss; H N Fernley
Journal:  Biochem J       Date:  1971-05       Impact factor: 3.857

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  43 in total

1.  Expression of chlorocatechol 1,2-dioxygenase and chlorocatechol 2,3-dioxygenase genes in chlorobenzene-contaminated subsurface samples.

Authors:  Albin Alfreider; Carsten Vogt; Wolfgang Babel
Journal:  Appl Environ Microbiol       Date:  2003-03       Impact factor: 4.792

2.  Microbial degradation of chloroaromatics: use of the meta-cleavage pathway for mineralization of chlorobenzene.

Authors:  A E Mars; T Kasberg; S R Kaschabek; M H van Agteren; D B Janssen; W Reineke
Journal:  J Bacteriol       Date:  1997-07       Impact factor: 3.490

3.  Characterization of the genes for two protocatechuate 3, 4-dioxygenases from the 4-sulfocatechol-degrading bacterium Agrobacterium radiobacter strain S2.

Authors:  M Contzen; A Stolz
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

4.  Two chlorocatechol catabolic gene modules on plasmid pJP4.

Authors:  Michael Schlömann
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

5.  Degradation of fluorobenzene by Rhizobiales strain F11 via ortho cleavage of 4-fluorocatechol and catechol.

Authors:  Maria F Carvalho; Maria Isabel M Ferreira; Irina S Moreira; Paula M L Castro; Dick B Janssen
Journal:  Appl Environ Microbiol       Date:  2006-09-15       Impact factor: 4.792

6.  Amphipatic molecules affect the kinetic profile of Pseudomonas putida chlorocatechol 1,2-dioxygenase.

Authors:  Nathalya C M R Mesquita; Fábio H Dyszy; Patricia S Kumagai; Ana P U Araújo; Antonio J Costa-Filho
Journal:  Eur Biophys J       Date:  2013-06-11       Impact factor: 1.733

7.  Biochemical and structural characterization of a novel cold-active esterase-like protein from the psychrophilic yeast Glaciozyma antarctica.

Authors:  Noor Haza Fazlin Hashim; Nor Muhammad Mahadi; Rosli Md Illias; Shevin Rizal Feroz; Farah Diba Abu Bakar; Abdul Munir Abdul Murad
Journal:  Extremophiles       Date:  2018-03-20       Impact factor: 2.395

8.  Characterization of muconate and chloromuconate cycloisomerase from Rhodococcus erythropolis 1CP: indications for functionally convergent evolution among bacterial cycloisomerases.

Authors:  I P Solyanikova; O V Maltseva; M D Vollmer; L A Golovleva; M Schlömann
Journal:  J Bacteriol       Date:  1995-05       Impact factor: 3.490

9.  Evolution of a pathway for chlorobenzene metabolism leads to natural attenuation in contaminated groundwater

Authors: 
Journal:  Appl Environ Microbiol       Date:  1998-11       Impact factor: 4.792

10.  Conversion of 3-chlorocatechol by various catechol 2,3-dioxygenases and sequence analysis of the chlorocatechol dioxygenase region of Pseudomonas putida GJ31.

Authors:  A E Mars; J Kingma; S R Kaschabek; W Reineke; D B Janssen
Journal:  J Bacteriol       Date:  1999-02       Impact factor: 3.490

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