Literature DB >> 7765837

On the origins and functions of the enzymes of the 4-chlorobenzoate to 4-hydroxybenzoate converting pathway.

D Dunaway-Mariano1, P C Babbitt.   

Abstract

This review examines the enzymes of 4-chlorobenzoate to 4-hydroxybenzoate converting pathway found in certain soil bacteria. This pathway consists of three enzymes: 4-chlorobenzoate: Coenzyme A ligase, 4-chlorobenzoyl-Coenzyme A dehalogenase and 4-hydroxybenzoyl-Coenzyme A thioesterase. Recent progress made in the cloning and expression of the pathway genes from assorted bacterial strains is described. Gene order and sequence found among these strains are compared to reveal independent enzyme recruitment strategies. Sequence alignments made between the Pseudomonas sp. strain CBS3 4-chlorobenzoate pathway enzymes and structurally related proteins contained within the protein sequence data banks suggest possible origins in preexisting beta-oxidation pathways. The purification and characterization of the physical and kinetic properties of the pathway enzymes are described. Where possible a comparison of these properties between like enzymes from different bacterial sources are made.

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Year:  1994        PMID: 7765837     DOI: 10.1007/BF00696464

Source DB:  PubMed          Journal:  Biodegradation        ISSN: 0923-9820            Impact factor:   3.909


  87 in total

1.  Cloning and sequencing of a bile acid-inducible operon from Eubacterium sp. strain VPI 12708.

Authors:  D H Mallonee; W B White; P B Hylemon
Journal:  J Bacteriol       Date:  1990-12       Impact factor: 3.490

2.  Molecular cloning and sequence analysis of the cDNA for rat mitochondrial enoyl-CoA hydratase. Structural and evolutionary relationships linked to the bifunctional enzyme of the peroxisomal beta-oxidation system.

Authors:  N Minami-Ishii; S Taketani; T Osumi; T Hashimoto
Journal:  Eur J Biochem       Date:  1989-10-20

3.  Gramicidin S biosynthesis operon containing the structural genes grsA and grsB has an open reading frame encoding a protein homologous to fatty acid thioesterases.

Authors:  J Krätzschmar; M Krause; M A Marahiel
Journal:  J Bacteriol       Date:  1989-10       Impact factor: 3.490

4.  Cloning and sequence analysis of cDNA for luciferase of a Japanese firefly, Luciola cruciata.

Authors:  T Masuda; H Tatsumi; E Nakano
Journal:  Gene       Date:  1989-04-30       Impact factor: 3.688

5.  Primary sequence of the Escherichia coli fadBA operon, encoding the fatty acid-oxidizing multienzyme complex, indicates a high degree of homology to eucaryotic enzymes.

Authors:  C C DiRusso
Journal:  J Bacteriol       Date:  1990-11       Impact factor: 3.490

6.  Isolation and characterization of the three polypeptide components of 4-chlorobenzoate dehalogenase from Pseudomonas sp. strain CBS-3.

Authors:  K H Chang; P H Liang; W Beck; J D Scholten; D Dunaway-Mariano
Journal:  Biochemistry       Date:  1992-06-23       Impact factor: 3.162

7.  Bacterial dehalogenation of chlorobenzoates and coculture biodegradation of 4,4'-dichlorobiphenyl.

Authors:  P Adriaens; H P Kohler; D Kohler-Staub; D D Focht
Journal:  Appl Environ Microbiol       Date:  1989-04       Impact factor: 4.792

8.  Cloning and disruption of a gene required for growth on acetate but not on ethanol: the acetyl-coenzyme A synthetase gene of Saccharomyces cerevisiae.

Authors:  C De Virgilio; N Bürckert; G Barth; J M Neuhaus; T Boller; A Wiemken
Journal:  Yeast       Date:  1992-12       Impact factor: 3.239

9.  Incorporation of [18O]water into 4-hydroxybenzoic acid in the reaction of 4-chlorobenzoate dehalogenase from pseudomonas spec. CBS 3.

Authors:  R Müller; J Thiele; U Klages; F Lingens
Journal:  Biochem Biophys Res Commun       Date:  1984-10-15       Impact factor: 3.575

10.  Complete nucleotide sequences and comparison of the structural genes of two 2-haloalkanoic acid dehalogenases from Pseudomonas sp. strain CBS3.

Authors:  B Schneider; R Müller; R Frank; F Lingens
Journal:  J Bacteriol       Date:  1991-02       Impact factor: 3.490

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  17 in total

1.  Structural Insights into Anthranilate Priming during Type II Polyketide Biosynthesis.

Authors:  David R Jackson; Stephanie S Tu; MyChi Nguyen; Jesus F Barajas; Andrew J Schaub; Daniel Krug; Dominik Pistorius; Ray Luo; Rolf Müller; Shiou-Chuan Tsai
Journal:  ACS Chem Biol       Date:  2015-11-03       Impact factor: 5.100

2.  The catalytic mechanism of the hotdog-fold enzyme superfamily 4-hydroxybenzoyl-CoA thioesterase from Arthrobacter sp. strain SU.

Authors:  Feng Song; James B Thoden; Zhihao Zhuang; John Latham; Michael Trujillo; Hazel M Holden; Debra Dunaway-Mariano
Journal:  Biochemistry       Date:  2012-08-20       Impact factor: 3.162

3.  2-Ketocyclohexanecarboxyl coenzyme A hydrolase, the ring cleavage enzyme required for anaerobic benzoate degradation by Rhodopseudomonas palustris.

Authors:  D A Pelletier; C S Harwood
Journal:  J Bacteriol       Date:  1998-05       Impact factor: 3.490

4.  A Thioester Substrate Binds to the Enzyme Arthrobacter Thioesterase in Two Ionization States; Evidence from Raman Difference Spectroscopy.

Authors:  Jian Dong; Zhihao Zhuang; Feng Song; Debra Dunaway-Mariano; Paul R Carey
Journal:  J Raman Spectrosc       Date:  2012-01-01       Impact factor: 3.133

5.  Investigation of the catalytic mechanism of the hotdog-fold enzyme superfamily Pseudomonas sp. strain CBS3 4-hydroxybenzoyl-CoA thioesterase.

Authors:  Zhihao Zhuang; John Latham; Feng Song; Wenhai Zhang; Michael Trujillo; Debra Dunaway-Mariano
Journal:  Biochemistry       Date:  2012-01-13       Impact factor: 3.162

6.  Chlorobenzoate-degrading bacteria in similar pristine soils exhibit different community structures and population dynamics in response to anthropogenic 2-, 3-, and 4-chlorobenzoate levels.

Authors:  T J Gentry; G Wang; C Rensing; I L Pepper
Journal:  Microb Ecol       Date:  2004-04-19       Impact factor: 4.552

7.  Characterization of the 4-hydroxybenzoyl-coenzyme A thioesterase from Arthrobacter sp. strain SU.

Authors:  Zhihao Zhuang; Karl-Heinz Gartemann; Rudolf Eichenlaub; Debra Dunaway-Mariano
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

8.  The hydrogenase gene cluster of Rhizobium leguminosarum bv. viciae contains an additional gene (hypX), which encodes a protein with sequence similarity to the N10-formyltetrahydrofolate-dependent enzyme family and is required for nickel-dependent hydrogenase processing and activity.

Authors:  L Rey; D Fernández; B Brito; Y Hernando; J M Palacios; J Imperial; T Ruiz-Argüeso
Journal:  Mol Gen Genet       Date:  1996-09-13

9.  Biochemical and crystallographic analysis of substrate binding and conformational changes in acetyl-CoA synthetase.

Authors:  Albert S Reger; Jill M Carney; Andrew M Gulick
Journal:  Biochemistry       Date:  2007-05-12       Impact factor: 3.162

10.  Rational redesign of the 4-chlorobenzoate binding site of 4-chlorobenzoate: coenzyme a ligase for expanded substrate range.

Authors:  Rui Wu; Albert S Reger; Jian Cao; Andrew M Gulick; Debra Dunaway-Mariano
Journal:  Biochemistry       Date:  2007-11-21       Impact factor: 3.162

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