Literature DB >> 7764710

Antibodies as thermolabile switches: high temperature triggering for the polymerase chain reaction.

D J Sharkey1, E R Scalice, K G Christy, S M Atwood, J L Daiss.   

Abstract

We demonstrate the utility of antibodies to the DNA polymerase from Thermus aquaticus (TaqPol) as thermolabile inhibitors of TaqPol activity. One of the limitations of the polymerase chain reaction (PCR) is the co-amplification of non-specific products caused by TaqPol activity on low stringency templates present in the initial cycle of PCR. We have used anti-TaqPol antibodies as thermolabile switches that inhibit TaqPol activity at low temperatures (20-40 degrees C) and release fully active TaqPol when they are inactivated by elevated temperatures in the PCR thermal cycling (70-98 degrees C). Several in a set of high affinity anti-TaqPol monoclonal antibodies fully inhibited TaqPol activity at 37 degrees C. The capacity for inhibition was ablated by incubation at temperatures high enough to denature antibodies but not sufficiently high to significantly reduce TaqPol activity. In a PCR model system, preincubation of TaqPol with these antibodies yielded PCR product consisting entirely of the intended product and the absence or significant reduction of non-specific products and primer dimers. In evaluation of clinical samples such antibody triggering yielded defined PCR product and higher sensitivity because of the absence of non-specific products.

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Year:  1994        PMID: 7764710     DOI: 10.1038/nbt0594-506

Source DB:  PubMed          Journal:  Biotechnology (N Y)        ISSN: 0733-222X


  15 in total

1.  Cold-sensitive mutants of Taq DNA polymerase provide a hot start for PCR.

Authors:  Milko B Kermekchiev; Anatoly Tzekov; Wayne M Barnes
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

2.  Sequential DEXAS: a method for obtaining DNA sequences from genomic DNA and blood in one reaction.

Authors:  Michael Motz; Gregor Sagner; Svante Pääbo; Christian Kilger
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

3.  Kinetics of DNA elongation.

Authors:  V I Bykov; A V Lukovenkov; S D Varfolomeev
Journal:  Dokl Biochem Biophys       Date:  2017-07-20       Impact factor: 0.788

Review 4.  Heat denaturation of the antibody, a multi-domain protein.

Authors:  Yoko Akazawa-Ogawa; Hidenori Nagai; Yoshihisa Hagihara
Journal:  Biophys Rev       Date:  2017-12-18

5.  Prevalence of human herpesvirus 8 DNA sequences in several patient populations.

Authors:  C C Marchioli; J L Love; L Z Abbott; Y Q Huang; S C Remick; N Surtento-Reodica; R E Hutchison; D Mildvan; A E Friedman-Kien; B J Poiesz
Journal:  J Clin Microbiol       Date:  1996-10       Impact factor: 5.948

Review 6.  Application of nucleic acid amplification in clinical microbiology.

Authors:  G Lisby
Journal:  Mol Biotechnol       Date:  1999-08       Impact factor: 2.695

7.  Rate of infection of Ixodes ricinus ticks with Borrelia burgdorferi sensu stricto, Borrelia garinii, Borrelia afzelii and group VS116 in an endemic focus of Lyme disease in Italy.

Authors:  M Cinco; D Padovan; R Murgia; L Poldini; L Frusteri; I van de Pol; N Verbeek-De Kruif; S Rijpkema; M Maroli
Journal:  Eur J Clin Microbiol Infect Dis       Date:  1998-02       Impact factor: 3.267

8.  Crystal structure of Taq DNA polymerase in complex with an inhibitory Fab: the Fab is directed against an intermediate in the helix-coil dynamics of the enzyme.

Authors:  R Murali; D J Sharkey; J L Daiss; H M Murthy
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-13       Impact factor: 11.205

9.  Specific versus nonspecific isothermal DNA amplification through thermophilic polymerase and nicking enzyme activities.

Authors:  Eric Tan; Barbara Erwin; Shale Dames; Tanya Ferguson; Megan Buechel; Bruce Irvine; Karl Voelkerding; Angelika Niemz
Journal:  Biochemistry       Date:  2008-08-26       Impact factor: 3.162

10.  Characterization of family IV UDG from Aeropyrum pernix and its application in hot-start PCR by family B DNA polymerase.

Authors:  Xi-Peng Liu; Jian-Hua Liu
Journal:  PLoS One       Date:  2011-11-08       Impact factor: 3.240

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