Literature DB >> 7757816

[IMAGE: molecular integration of the analysis of the human genome and its expression].

C Auffray1, G Behar, F Bois, C Bouchier, C Da Silva, M D Devignes, S Duprat, R Houlgatte, M N Jumeau, B Lamy.   

Abstract

We have developed an integrated approach for the analysis of human cDNA libraries from neuromuscular tissues, based on the acquisition of primary structural, expression and mapping data. 26,938 sequence signatures (over 7 million bases) have been derived from both ends of skeletal muscle and brain cDNA clones. Primary redundancy analysis and classification of database similarities made it possible to characterize by structural data about 8,000 human gene transcripts, the majority of which is catalogued for the first time. Collecting hybridization signatures of complex cDNA probes derived from the tissues of origin to cDNA clones arrayed on high density filters provided a global and quantifiable view of the complexity and level of expression of the different transcripts. The development of 2,792 eSTS markers amplifiable by PCR defined the chromosomal localization of some 2,500 genes corresponding to the transcripts sequenced. The data collected are part of the corpus of the human gene transcript catalog and the genic map of the human genome.

Entities:  

Mesh:

Year:  1995        PMID: 7757816

Source DB:  PubMed          Journal:  C R Acad Sci III        ISSN: 0764-4469


  9 in total

1.  The genexpress IMAGE knowledge base of the human muscle transcriptome: a resource of structural, functional, and positional candidate genes for muscle physiology and pathologies.

Authors:  G Piétu; E Eveno; B Soury-Segurens; N A Fayein; R Mariage-Samson; C Matingou; E Leroy; C Dechesne; S Krieger; W Ansorge; I Reguigne-Arnould; D Cox; A Dehejia; M H Polymeropoulos; M D Devignes; C Auffray
Journal:  Genome Res       Date:  1999-12       Impact factor: 9.043

2.  A survey of the goat genome transcribed in the lactating mammary gland.

Authors:  F Le Provost; A Lépingle; P Martin
Journal:  Mamm Genome       Date:  1996-09       Impact factor: 2.957

3.  A bacterial artificial chromosome-based framework contig map of human chromosome 22q.

Authors:  U J Kim; H Shizuya; H L Kang; S S Choi; C L Garrett; L J Smink; B W Birren; J R Korenberg; I Dunham; M I Simon
Journal:  Proc Natl Acad Sci U S A       Date:  1996-06-25       Impact factor: 11.205

4.  Multiplex messenger assay: simultaneous, quantitative measurement of expression of many genes in the context of T cell activation.

Authors:  K Bernard; N Auphan; S Granjeaud; G Victorero; A M Schmitt-Verhulst; B R Jordan; C Nguyen
Journal:  Nucleic Acids Res       Date:  1996-04-15       Impact factor: 16.971

5.  Direct isolation of human transcribed sequences from yeast artificial chromosomes through the application of RNA fingerprinting.

Authors:  I H Still; P Vince; J K Cowell
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-16       Impact factor: 11.205

6.  The Genexpress IMAGE knowledge base of the human brain transcriptome: a prototype integrated resource for functional and computational genomics.

Authors:  G Piétu; R Mariage-Samson; N A Fayein; C Matingou; E Eveno; R Houlgatte; C Decraene; Y Vandenbrouck; F Tahi; M D Devignes; U Wirkner; W Ansorge; D Cox; T Nagase; N Nomura; C Auffray
Journal:  Genome Res       Date:  1999-02       Impact factor: 9.043

7.  Molecular cloning and functional expression of a novel human gene encoding two 41-43 kDa skeletal muscle internal membrane proteins.

Authors:  S Bouju; M F Lignon; G Piétu; M Le Cunff; J J Léger; C Auffray; C A Dechesne
Journal:  Biochem J       Date:  1998-11-01       Impact factor: 3.857

8.  TWIK-1, a ubiquitous human weakly inward rectifying K+ channel with a novel structure.

Authors:  F Lesage; E Guillemare; M Fink; F Duprat; M Lazdunski; G Romey; J Barhanin
Journal:  EMBO J       Date:  1996-03-01       Impact factor: 11.598

9.  Integrative annotation of 21,037 human genes validated by full-length cDNA clones.

Authors:  Tadashi Imanishi; Takeshi Itoh; Yutaka Suzuki; Claire O'Donovan; Satoshi Fukuchi; Kanako O Koyanagi; Roberto A Barrero; Takuro Tamura; Yumi Yamaguchi-Kabata; Motohiko Tanino; Kei Yura; Satoru Miyazaki; Kazuho Ikeo; Keiichi Homma; Arek Kasprzyk; Tetsuo Nishikawa; Mika Hirakawa; Jean Thierry-Mieg; Danielle Thierry-Mieg; Jennifer Ashurst; Libin Jia; Mitsuteru Nakao; Michael A Thomas; Nicola Mulder; Youla Karavidopoulou; Lihua Jin; Sangsoo Kim; Tomohiro Yasuda; Boris Lenhard; Eric Eveno; Yoshiyuki Suzuki; Chisato Yamasaki; Jun-ichi Takeda; Craig Gough; Phillip Hilton; Yasuyuki Fujii; Hiroaki Sakai; Susumu Tanaka; Clara Amid; Matthew Bellgard; Maria de Fatima Bonaldo; Hidemasa Bono; Susan K Bromberg; Anthony J Brookes; Elspeth Bruford; Piero Carninci; Claude Chelala; Christine Couillault; Sandro J de Souza; Marie-Anne Debily; Marie-Dominique Devignes; Inna Dubchak; Toshinori Endo; Anne Estreicher; Eduardo Eyras; Kaoru Fukami-Kobayashi; Gopal R Gopinath; Esther Graudens; Yoonsoo Hahn; Michael Han; Ze-Guang Han; Kousuke Hanada; Hideki Hanaoka; Erimi Harada; Katsuyuki Hashimoto; Ursula Hinz; Momoki Hirai; Teruyoshi Hishiki; Ian Hopkinson; Sandrine Imbeaud; Hidetoshi Inoko; Alexander Kanapin; Yayoi Kaneko; Takeya Kasukawa; Janet Kelso; Paul Kersey; Reiko Kikuno; Kouichi Kimura; Bernhard Korn; Vladimir Kuryshev; Izabela Makalowska; Takashi Makino; Shuhei Mano; Regine Mariage-Samson; Jun Mashima; Hideo Matsuda; Hans-Werner Mewes; Shinsei Minoshima; Keiichi Nagai; Hideki Nagasaki; Naoki Nagata; Rajni Nigam; Osamu Ogasawara; Osamu Ohara; Masafumi Ohtsubo; Norihiro Okada; Toshihisa Okido; Satoshi Oota; Motonori Ota; Toshio Ota; Tetsuji Otsuki; Dominique Piatier-Tonneau; Annemarie Poustka; Shuang-Xi Ren; Naruya Saitou; Katsunaga Sakai; Shigetaka Sakamoto; Ryuichi Sakate; Ingo Schupp; Florence Servant; Stephen Sherry; Rie Shiba; Nobuyoshi Shimizu; Mary Shimoyama; Andrew J Simpson; Bento Soares; Charles Steward; Makiko Suwa; Mami Suzuki; Aiko Takahashi; Gen Tamiya; Hiroshi Tanaka; Todd Taylor; Joseph D Terwilliger; Per Unneberg; Vamsi Veeramachaneni; Shinya Watanabe; Laurens Wilming; Norikazu Yasuda; Hyang-Sook Yoo; Marvin Stodolsky; Wojciech Makalowski; Mitiko Go; Kenta Nakai; Toshihisa Takagi; Minoru Kanehisa; Yoshiyuki Sakaki; John Quackenbush; Yasushi Okazaki; Yoshihide Hayashizaki; Winston Hide; Ranajit Chakraborty; Ken Nishikawa; Hideaki Sugawara; Yoshio Tateno; Zhu Chen; Michio Oishi; Peter Tonellato; Rolf Apweiler; Kousaku Okubo; Lukas Wagner; Stefan Wiemann; Robert L Strausberg; Takao Isogai; Charles Auffray; Nobuo Nomura; Takashi Gojobori; Sumio Sugano
Journal:  PLoS Biol       Date:  2004-04-20       Impact factor: 8.029

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.