Literature DB >> 7711732

Analysis of 2166 clones from a human colorectal cancer cDNA library by partial sequencing.

J M Frigerio1, P Berthézène, P Garrido, E Ortiz, S Barthellemy, S Vasseur, B Sastre, I Seleznieff, J C Dagorn, J L Iovanna.   

Abstract

Large scale sequencing of cDNAs from a tissue-specific library provides information on the functional phenotype of that tissue and the clones constitute a reservoir of biological markers. For these reasons, we have randomly sequenced 2166 clones of a cDNA library constructed with human colorectal cancer mRNAs. Database searches indicated that 1014 of the cDNAs represented known human genes or human homologs of other genes, 142 sequences corresponded to known ESTs, 119 sequences corresponded to 28S rRNA, repetitive sequences or poly(A) stretches only, and 891 corresponded to unknown transcripts representing the products of 740 new genes. Preliminary studies demonstrated that expression of some of them was altered in cancer. That cDNA collection is therefore a source of potential markers of colorectal cancer.

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Year:  1995        PMID: 7711732     DOI: 10.1093/hmg/4.1.37

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  8 in total

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2.  Evaluation and characterization of a porcine small intestine cDNA library: analysis of 839 clones.

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4.  Construction of a human heart cDNA library and identification of cardiovascular based genes (CVBest).

Authors:  C C Liew; D M Hwang; R X Wang; S H Ng; A Dempsey; D H Wen; H Ma; E Cukerman; X G Zhao; Y Q Liu; X K Qiu; X M Zhou; J R Gu; S Tsui; K P Fung; M M Waye; C Y Lee
Journal:  Mol Cell Biochem       Date:  1997-07       Impact factor: 3.396

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6.  Transcription enhancer factor 3 (TEF3) mediates the expression of Down syndrome candidate region 1 isoform 1 (DSCR1-1L) in endothelial cells.

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Journal:  J Biol Chem       Date:  2008-10-07       Impact factor: 5.157

7.  DWNN, a novel ubiquitin-like domain, implicates RBBP6 in mRNA processing and ubiquitin-like pathways.

Authors:  David J R Pugh; Eiso Ab; Andrew Faro; Portia T Lutya; Eberhard Hoffmann; D Jasper G Rees
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8.  Single cell transcriptomics of mouse kidney transplants reveals a myeloid cell pathway for transplant rejection.

Authors:  Anil Dangi; Naveen R Natesh; Irma Husain; Zhicheng Ji; Laura Barisoni; Jean Kwun; Xiling Shen; Edward B Thorp; Xunrong Luo
Journal:  JCI Insight       Date:  2020-10-15
  8 in total

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