Literature DB >> 7711072

Sequence and putative secondary structure of group I introns in the nuclear-encoded ribosomal RNA genes of the fungus Hymenoscyphus ericae.

K N Egger1, G Osmond, J L Goodier.   

Abstract

Two putative group I introns in the nuclear ribosomal RNA genes of Hymenoscyphus ericae are described. One is in the small subunit gene about 30 nucleotides upstream of the 3' end of the gene at a site common to several other group I introns. The other is in the large subunit gene approx. 930 bp downstream of the 5' end of the gene. This is the only report of an intron at this location.

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Year:  1995        PMID: 7711072     DOI: 10.1016/0167-4781(95)00012-6

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  6 in total

1.  Molecular diversity and phylogenetic affinities of symbiotic root-associated ascomycetes of the Helotiales in burnt and metal polluted habitats.

Authors:  Trude Vrålstad; Elin Myhre; Trond Schumacher
Journal:  New Phytol       Date:  2002-07       Impact factor: 10.151

2.  Three different group I introns in the nuclear large subunit ribosomal DNA of the amoeboflagellate Naegleria.

Authors:  J F De Jonckheere; S Brown
Journal:  Nucleic Acids Res       Date:  1998-01-15       Impact factor: 16.971

3.  First record of Rhizoscyphus ericae in Southern Hemisphere's Ericaceae.

Authors:  M Clara Bruzone; Judith Fehrer; Sonia B Fontenla; Martin Vohník
Journal:  Mycorrhiza       Date:  2016-10-25       Impact factor: 3.387

4.  Occurrence and characteristics of group 1 introns found at three different positions within the 28S ribosomal RNA gene of the dematiaceous Phialophora verrucosa: phylogenetic and secondary structural implications.

Authors:  Kayoko Takizawa; Toko Hashizume; Katsuhiko Kamei
Journal:  BMC Microbiol       Date:  2011-05-08       Impact factor: 3.605

5.  Fungal-specific PCR primers developed for analysis of the ITS region of environmental DNA extracts.

Authors:  Kendall J Martin; Paul T Rygiewicz
Journal:  BMC Microbiol       Date:  2005-05-18       Impact factor: 3.605

6.  Accurate Estimation of Fungal Diversity and Abundance through Improved Lineage-Specific Primers Optimized for Illumina Amplicon Sequencing.

Authors:  D Lee Taylor; William A Walters; Niall J Lennon; James Bochicchio; Andrew Krohn; J Gregory Caporaso; Taina Pennanen
Journal:  Appl Environ Microbiol       Date:  2016-11-21       Impact factor: 4.792

  6 in total

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