Literature DB >> 7707368

Glycine codon discrimination and the nucleotide in position 32 of the anticodon loop.

C Claesson1, F Lustig, T Borén, C Simonsson, M Barciszewska, U Lagerkvist.   

Abstract

Using an in vitro protein-synthesizing system that allowed us to monitor separately the reading of each glycine codon, we have previously shown, that in constructs based on glycine tRNA1 from Escherichia coli the nature of the nucleotide in position 32 determines the ability of the anticodon UCC to discriminate between the glycine codons. Thus, with a U in position 32 the anticodon UCC discriminated according to the wobble rules, but with a C in this position it had lost its ability to discriminate. In the present paper we show that the same is true also for constructs based on mycoplasma glycine tRNA. When C32 in the wild type was changed to U32, the anticodon UCC discriminated between the glycine codons, while in wild type mycoplasma glycine tRNA it did not. Furthermore, when U32 was changed to C32 in glycine tRNA1(CCC), the anticodon CCC loses its ability to discriminate. We therefore conclude that the nature of the nucleotide in position 32 determines the discriminatory ability of both anticodons UCC and CCC in the glycine tRNA1 structural background, and that the same is true for the anticodon UCC in the mycoplasma glycine tRNA background.

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Year:  1995        PMID: 7707368     DOI: 10.1006/jmbi.1994.0132

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  17 in total

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Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

2.  Anticodon-dependent conservation of bacterial tRNA gene sequences.

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Review 3.  A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment.

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Authors:  Ilia Targanski; Vera Cherkasova
Journal:  RNA       Date:  2008-04-25       Impact factor: 4.942

5.  H-bond stability in the tRNA(Asp) anticodon hairpin: 3 ns of multiple molecular dynamics simulations.

Authors:  P Auffinger; E Westhof
Journal:  Biophys J       Date:  1996-08       Impact factor: 4.033

6.  Codon-reading specificity of an unmodified form of Escherichia coli tRNA1Ser in cell-free protein synthesis.

Authors:  K Takai; H Takaku; S Yokoyama
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Review 7.  Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use.

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8.  Capture and Release of tRNA by the T-Loop Receptor in the Function of the T-Box Riboswitch.

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Journal:  Biochemistry       Date:  2017-07-03       Impact factor: 3.162

9.  Solution nuclear magnetic resonance analyses of the anticodon arms of proteinogenic and nonproteinogenic tRNA(Gly).

Authors:  Andrew T Chang; Edward P Nikonowicz
Journal:  Biochemistry       Date:  2012-04-18       Impact factor: 3.162

10.  A sequence element that tunes Escherichia coli tRNA(Ala)(GGC) to ensure accurate decoding.

Authors:  Sarah Ledoux; Mikołaj Olejniczak; Olke C Uhlenbeck
Journal:  Nat Struct Mol Biol       Date:  2009-03-22       Impact factor: 15.369

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