Literature DB >> 7703843

Quantification of the calcium-induced secondary structural changes in the regulatory domain of troponin-C.

S M Gagné1, S Tsuda, M X Li, M Chandra, L B Smillie, B D Sykes.   

Abstract

The backbone resonance assignments have been completed for the apo (1H and 15N) and calcium-loaded (1H, 15N, and 13C) regulatory N-domain of chicken skeletal troponin-C (1-90), using multidimensional homonuclear and heteronuclear NMR spectroscopy. The chemical-shift information, along with detailed NOE analysis and 3JHNH alpha coupling constants, permitted the determination and quantification of the Ca(2+)-induced secondary structural change in the N-domain of TnC. For both structures, 5 helices and 2 short beta-strands were found, as was observed in the apo N-domain of the crystal structure of whole TnC (Herzberg O, James MNG, 1988, J Mol Biol 203:761-779). The NMR solution structure of the apo form is indistinguishable from the crystal structure, whereas some structural differences are evident when comparing the 2Ca2+ state solution structure with the apo one. The major conformational change observed is the straightening of helix-B upon Ca2+ binding. The possible importance and role of this conformational change is explored. Previous CD studies on the regulatory domain of TnC showed a significant Ca(2+)-induced increase in negative ellipticity, suggesting a significant increase in helical content upon Ca2+ binding. The present study shows that there is virtually no change in alpha-helical content associated with the transition from apo to the 2Ca2+ state of the N-domain of TnC. Therefore, the Ca(2+)-induced increase in ellipticity observed by CD does not relate to a change in helical content, but more likely to changes in spatial orientation of helices.

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Year:  1994        PMID: 7703843      PMCID: PMC2142632          DOI: 10.1002/pro.5560031108

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  40 in total

1.  Calcium binding by troponin-C. A proton magnetic resonance study.

Authors:  B A Levine; D M Coffman; J M Thornton
Journal:  J Mol Biol       Date:  1977-10-05       Impact factor: 5.469

2.  Ca2+ and Mg2+ dependent conformations of troponin C as determined by 1H and 19F nuclear magnetic resonance.

Authors:  K B Seamon; D J Hartshorne; A A Bothner-By
Journal:  Biochemistry       Date:  1977-09-06       Impact factor: 3.162

3.  Calcium-binding properties of cardiac and skeletal troponin C as determined by circular dichroism and ultraviolet difference spectroscopy.

Authors:  M T Hincke; W D McCubbin; C M Kay
Journal:  Can J Biochem       Date:  1978-06

4.  Determination of the helix and beta form of proteins in aqueous solution by circular dichroism.

Authors:  Y H Chen; J T Yang; K H Chau
Journal:  Biochemistry       Date:  1974-07-30       Impact factor: 3.162

5.  Proteolytic fragments of troponin C. Localization of high and low affinity Ca2+ binding sites and interactions with troponin I and troponin T.

Authors:  P C Leavis; S S Rosenfeld; J Gergely; Z Grabarek; W Drabikowski
Journal:  J Biol Chem       Date:  1978-08-10       Impact factor: 5.157

6.  Extent and localization of conformational changes in troponin C caused by calcium binding. Spectral studies in the presence and absence of 6 M urea.

Authors:  B Nagy; J Gergely
Journal:  J Biol Chem       Date:  1979-12-25       Impact factor: 5.157

7.  Comparison of the calcium- and magnesium-induced structural changes of troponin--C. A proton magnetic resonance study.

Authors:  B A Levine; J M Thornton; R Fernandes; C M Kelly; D Mercola
Journal:  Biochim Biophys Acta       Date:  1978-07-21

8.  Detection of two classes of Ca2+ binding sites in troponin C with circular dichroism and tyrosine fluorescence.

Authors:  J D Johnson; J D Potter
Journal:  J Biol Chem       Date:  1978-06-10       Impact factor: 5.157

9.  Solution structure of the TR1C fragment of skeletal muscle troponin-C.

Authors:  W A Findlay; F D Sönnichsen; B D Sykes
Journal:  J Biol Chem       Date:  1994-03-04       Impact factor: 5.157

10.  The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data.

Authors:  D S Wishart; B D Sykes
Journal:  J Biomol NMR       Date:  1994-03       Impact factor: 2.835

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  31 in total

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Authors:  I Bertini; A Donaire; B Jiménez; C Luchinat; G Parigi; M Piccioli; L Poggi
Journal:  J Biomol NMR       Date:  2001-10       Impact factor: 2.835

2.  Solution structure of the DNA-binding domain of the TyrR protein of Haemophilus influenzae.

Authors:  Y Wang; S Zhao; R L Somerville; O Jardetzky
Journal:  Protein Sci       Date:  2001-03       Impact factor: 6.725

3.  Experimentally exploring the conformational space sampled by domain reorientation in calmodulin.

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Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-20       Impact factor: 11.205

4.  Solution structures of reduced and oxidized bacteriophage T4 glutaredoxin.

Authors:  Yunjun Wang; Godwin Amegbey; David S Wishart
Journal:  J Biomol NMR       Date:  2004-05       Impact factor: 2.835

5.  Structure of the Ets-1 pointed domain and mitogen-activated protein kinase phosphorylation site.

Authors:  C M Slupsky; L N Gentile; L W Donaldson; C D Mackereth; J J Seidel; B J Graves; L P McIntosh
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-13       Impact factor: 11.205

6.  Localization of ubiquinone-8 in the Na+-pumping NADH:quinone oxidoreductase from Vibrio cholerae.

Authors:  Marco S Casutt; Ruslan Nedielkov; Severin Wendelspiess; Sara Vossler; Uwe Gerken; Masatoshi Murai; Hideto Miyoshi; Heiko M Möller; Julia Steuber
Journal:  J Biol Chem       Date:  2011-09-01       Impact factor: 5.157

7.  Structure and dynamics of copper-free SOD: The protein before binding copper.

Authors:  Lucia Banci; Ivano Bertini; Francesca Cantini; Mariapina D'Onofrio; Maria Silvia Viezzoli
Journal:  Protein Sci       Date:  2002-10       Impact factor: 6.725

8.  NMR structural analysis of the soluble domain of ZiaA-ATPase and the basis of selective interactions with copper metallochaperone Atx1.

Authors:  Lucia Banci; Ivano Bertini; Simone Ciofi-Baffoni; Luisa Poggi; Murugendra Vanarotti; Stephen Tottey; Kevin J Waldron; Nigel J Robinson
Journal:  J Biol Inorg Chem       Date:  2009-07-16       Impact factor: 3.358

9.  4-Oxalocrotonate tautomerase, a 41-kDa homohexamer: backbone and side-chain resonance assignments, solution secondary structure, and location of active site residues by heteronuclear NMR spectroscopy.

Authors:  J T Stivers; C Abeygunawardana; C P Whitman; A S Mildvan
Journal:  Protein Sci       Date:  1996-04       Impact factor: 6.725

10.  Structural changes in factor VIIa induced by Ca2+ and tissue factor studied using circular dichroism spectroscopy.

Authors:  P O Freskgård; O H Olsen; E Persson
Journal:  Protein Sci       Date:  1996-08       Impact factor: 6.725

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