Literature DB >> 7703233

Simulation of charge-mutant acetylcholinesterases.

J Antosiewicz1, J A McCammon, S T Wlodek, M K Gilson.   

Abstract

A recent experimental study of human acetylcholinesterase has shown that the mutation of surface acidic residues has little effect on the rate constant for hydrolysis of acetylthiocholine. It was concluded, on this basis, that the reaction is not diffusion controlled and that electrostatic steering plays only a minor role in determining the rate. Here we examine this issue through Brownian dynamics simulations on Torpedo californica acetylcholinesterase in which the surface acidic residues homologous with those mutated in the human enzyme are artificially neutralized. The computed effects of the mutations on the rate constants reproduce quite well the modest effects of the mutations upon the measured encounter rates. Nonetheless, the electrostatic field of the enzyme is found to increase the rate constants by about an order of magnitude in both the wild type and the mutants. We therefore conclude that the mutation experiments do not disprove that electrostatic steering substantially affects the catalytic rate of acetylcholinesterase.

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Year:  1995        PMID: 7703233     DOI: 10.1021/bi00013a009

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  13 in total

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Authors:  Yuhua Song; Yongjie Zhang; Chandrajit L Bajaj; Nathan A Baker
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3.  Redesigning protein pKa values.

Authors:  Barbara Mary Tynan-Connolly; Jens Erik Nielsen
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4.  Design of fast enzymes by optimizing interaction potential in active site.

Authors:  H X Zhou; K Y Wong; M Vijayakumar
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

Review 5.  A speed limit for protein folding.

Authors:  J A McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-15       Impact factor: 11.205

6.  Calculated electrostatic gradients in recombinant human H-chain ferritin.

Authors:  T Douglas; D R Ripoll
Journal:  Protein Sci       Date:  1998-05       Impact factor: 6.725

7.  Electrostatic steering and ionic tethering in enzyme-ligand binding: insights from simulations.

Authors:  R C Wade; R R Gabdoulline; S K Lüdemann; V Lounnas
Journal:  Proc Natl Acad Sci U S A       Date:  1998-05-26       Impact factor: 11.205

8.  Backbone makes a significant contribution to the electrostatics of alpha/beta-barrel proteins.

Authors:  S Raychaudhuri; F Younas; P A Karplus; C H Faerman; D R Ripoll
Journal:  Protein Sci       Date:  1997-09       Impact factor: 6.725

9.  Incorporating protein conformational flexibility into the calculation of pH-dependent protein properties.

Authors:  E G Alexov; M R Gunner
Journal:  Biophys J       Date:  1997-05       Impact factor: 4.033

10.  Influence of the water structure on the acetylcholinesterase efficiency.

Authors:  Angela S F Ramos; Simone Techert
Journal:  Biophys J       Date:  2005-07-01       Impact factor: 4.033

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