Literature DB >> 7702754

The Surf-1 and Surf-2 genes and their essential bidirectional promoter elements are conserved between mouse and human.

A Lennard1, K Gaston, M Fried.   

Abstract

The organization of the Surfeit locus and the juxtaposition of at least five of the Surfeit genes (Surf-1 to -5) are conserved between mouse and human (Williams et al., 1988; Yon et al., 1993). In the mouse, the heterogeneous transcription start sites of the divergent Surf-1 and Surf-2 genes are separated by a maximum of only 73 bp (Williams and Fried, 1986). This region contains a bidirectional promoter composed of three major factor binding sites required for the efficient expression of both the Surf-1 and Surf-2 genes (Lennard and Fried, 1991). Here we report the isolation and characterization of the human Surf-1 and Surf-2 genes and their intergenic region. Although the major Surf-1 and Surf-2 transcription start sites are separated by 97 bp in the human and there are multiple differences in the mouse and human sequence between and around the transcriptional start sites, there is high conservation of the sequence specifying the three major factor binding sites of the bidirectional promoter. The three factor binding sites (HSu1, 2, and 3) present within the human promoter bind nuclear factors, of which the binding of HSu1 and HSu2 are competed by oligonucleotides carrying the corresponding mouse factor binding sites. The HSu3 site binds factors that are similar but apparently not direct homologs of those that bind to the equivalent mouse sequences. Human Surf-1 and Surf-2 cDNAs have been cloned and sequenced. The putative human Surf-1 and Surf-2 proteins are 77% and 69% identical to the corresponding mouse proteins.

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Year:  1994        PMID: 7702754     DOI: 10.1089/dna.1994.13.1117

Source DB:  PubMed          Journal:  DNA Cell Biol        ISSN: 1044-5498            Impact factor:   3.311


  8 in total

1.  Tissue-specific processing of the Surf-5 and Surf-4 mRNAs.

Authors:  K Garson; T Duhig; M Fried
Journal:  Gene Expr       Date:  1996

2.  A functional YY1 binding site is necessary and sufficient to activate Surf-1 promoter activity in response to serum growth factors.

Authors:  E G Cole; K Gaston
Journal:  Nucleic Acids Res       Date:  1997-09-15       Impact factor: 16.971

3.  Surfeit locus gene homologs are widely distributed in invertebrate genomes.

Authors:  N Armes; M Fried
Journal:  Mol Cell Biol       Date:  1996-10       Impact factor: 4.272

4.  CpG methylation has differential effects on the binding of YY1 and ETS proteins to the bi-directional promoter of the Surf-1 and Surf-2 genes.

Authors:  K Gaston; M Fried
Journal:  Nucleic Acids Res       Date:  1995-03-25       Impact factor: 16.971

5.  DNA compaction by the higher-order assembly of PRH/Hex homeodomain protein oligomers.

Authors:  Abdenour Soufi; Anyaporn Sawasdichai; Anshuman Shukla; Peter Noy; Tim Dafforn; Corinne Smith; Padma-Sheela Jayaraman; Kevin Gaston
Journal:  Nucleic Acids Res       Date:  2010-07-31       Impact factor: 16.971

6.  Genome-wide analysis of the transcription factor binding preference of human bi-directional promoters and functional annotation of related gene pairs.

Authors:  Bingchuan Liu; Jiajia Chen; Bairong Shen
Journal:  BMC Syst Biol       Date:  2011-05-04

7.  Systematic analysis of head-to-head gene organization: evolutionary conservation and potential biological relevance.

Authors:  Yuan-Yuan Li; Hui Yu; Zong-Ming Guo; Ting-Qing Guo; Kang Tu; Yi-Xue Li
Journal:  PLoS Comput Biol       Date:  2006-05-15       Impact factor: 4.475

8.  Mutations of SURF-1 in Leigh disease associated with cytochrome c oxidase deficiency.

Authors:  V Tiranti; K Hoertnagel; R Carrozzo; C Galimberti; M Munaro; M Granatiero; L Zelante; P Gasparini; R Marzella; M Rocchi; M P Bayona-Bafaluy; J A Enriquez; G Uziel; E Bertini; C Dionisi-Vici; B Franco; T Meitinger; M Zeviani
Journal:  Am J Hum Genet       Date:  1998-12       Impact factor: 11.025

  8 in total

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