Literature DB >> 7682452

Measurement of rotational dynamics by the simultaneous nonlinear analysis of optical and EPR data.

E J Hustedt1, C E Cobb, A H Beth, J M Beechem.   

Abstract

In the preceding companion article in this issue, an optical dye and a nitroxide radical were combined in a new dual function probe, 5-SLE. In this report, it is demonstrated that time-resolved optical anisotropy and electron paramagnetic resonance (EPR) data can be combined in a single analysis to measure rotational dynamics. Rigid-limit and rotational diffusion models for simulating nitroxide EPR data have been incorporated into a general non-linear least-squares procedure based on the Marquardt-Levenberg algorithm. Simultaneous fits to simulated time-resolved fluorescence anisotropy and linear EPR data, together with simultaneous fits to experimental time-resolved phosphorescence anisotropy decays and saturation transfer EPR (ST-EPR) spectra of 5-SLE noncovalently bound to bovine serum albumin (BSA) have been performed. These results demonstrate that data from optical and EPR experiments can be combined and globally fit to a single dynamic model.

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Year:  1993        PMID: 7682452      PMCID: PMC1262373          DOI: 10.1016/S0006-3495(93)81420-6

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  9 in total

1.  Mapping global angular transitions of proteins in assemblies using multiple extrinsic reporter groups.

Authors:  T P Burghardt; K Ajtai
Journal:  Biochemistry       Date:  1992-01-14       Impact factor: 3.162

2.  Global analysis of biochemical and biophysical data.

Authors:  J M Beechem
Journal:  Methods Enzymol       Date:  1992       Impact factor: 1.600

3.  Protein rotational dynamics investigated with a dual EPR/optical molecular probe. Spin-labeled eosin.

Authors:  C E Cobb; E J Hustedt; J M Beechem; A H Beth
Journal:  Biophys J       Date:  1993-03       Impact factor: 4.033

4.  A spectroscopic technique for measuring slow rotational diffusion of macromolecules. 1: Preparation and properties of a triplet probe.

Authors:  R J Cherry; A Cogoli; M Oppliger; G Schneider; G Semenza
Journal:  Biochemistry       Date:  1976-08-24       Impact factor: 3.162

5.  Triplet-state detection of labeled proteins using fluorescence recovery spectroscopy.

Authors:  A F Corin; E Blatt; T M Jovin
Journal:  Biochemistry       Date:  1987-04-21       Impact factor: 3.162

6.  Global analysis of fluorescence decay: applications to some unusual experimental and theoretical studies.

Authors:  J M Beechem; L Brand
Journal:  Photochem Photobiol       Date:  1986-09       Impact factor: 3.421

7.  Analysis of time-resolved fluorescence anisotropy decays.

Authors:  A J Cross; G R Fleming
Journal:  Biophys J       Date:  1984-07       Impact factor: 4.033

8.  Dynamic imaging of lateral diffusion by electron spin resonance and study of rotational dynamics in model membranes. Effect of cholesterol.

Authors:  Y K Shin; J H Freed
Journal:  Biophys J       Date:  1989-03       Impact factor: 4.033

9.  Probing cross-bridge angular transitions using multiple extrinsic reporter groups.

Authors:  K Ajtai; A Ringler; T P Burghardt
Journal:  Biochemistry       Date:  1992-01-14       Impact factor: 3.162

  9 in total
  16 in total

1.  Flexibility of duplex DNA on the submicrosecond timescale.

Authors:  T M Okonogi; A W Reese; S C Alley; P B Hopkins; B H Robinson
Journal:  Biophys J       Date:  1999-12       Impact factor: 4.033

2.  The conformation of serum albumin in solution: a combined phosphorescence depolarization-hydrodynamic modeling study.

Authors:  M L Ferrer; R Duchowicz; B Carrasco; J G de la Torre; A U Acuña
Journal:  Biophys J       Date:  2001-05       Impact factor: 4.033

3.  Flexibility of the cytoplasmic domain of the anion exchange protein, band 3, in human erythrocytes.

Authors:  S M Blackman; E J Hustedt; C E Cobb; A H Beth
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

4.  The sensitivity of saturation transfer electron paramagnetic resonance spectra to restricted amplitude uniaxial rotational diffusion.

Authors:  E J Hustedt; A H Beth
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

5.  Comparison of electron paramagnetic resonance methods to determine distances between spin labels on human carbonic anhydrase II.

Authors:  M Persson; J R Harbridge; P Hammarström; R Mitri; L G Mårtensson; U Carlsson; G R Eaton; S S Eaton
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

6.  High field/high frequency saturation transfer electron paramagnetic resonance spectroscopy: increased sensitivity to very slow rotational motions.

Authors:  Eric J Hustedt; Albert H Beth
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

7.  Protein rotational dynamics investigated with a dual EPR/optical molecular probe. Spin-labeled eosin.

Authors:  C E Cobb; E J Hustedt; J M Beechem; A H Beth
Journal:  Biophys J       Date:  1993-03       Impact factor: 4.033

8.  Resolution of multiphasic reactions by the combination of fluorescence total-intensity and anisotropy stopped-flow kinetic experiments.

Authors:  M R Otto; M P Lillo; J M Beechem
Journal:  Biophys J       Date:  1994-12       Impact factor: 4.033

9.  Distance measurements on a dual-labeled TOAC AChR M2δ peptide in mechanically aligned DMPC bilayers via dipolar broadening CW-EPR spectroscopy.

Authors:  Harishchandra Ghimire; Eric J Hustedt; Indra D Sahu; Johnson J Inbaraj; Robert McCarrick; Daniel J Mayo; Monica R Benedikt; Ryan T Lee; Stuart M Grosser; Gary A Lorigan
Journal:  J Phys Chem B       Date:  2012-03-19       Impact factor: 2.991

10.  A Straightforward Approach to the Analysis of Double Electron-Electron Resonance Data.

Authors:  Richard A Stein; Albert H Beth; Eric J Hustedt
Journal:  Methods Enzymol       Date:  2015-09-15       Impact factor: 1.600

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