Literature DB >> 7662289

rDNA targeted oligonucleotide primers for the identification of pathogenic yeasts in a polymerase chain reaction.

J W Fell1.   

Abstract

Species-specific oligonucleotide primers were designed for PCR identification of the basidiomycetous yeasts Cryptococcus neoformans, Trichosporon cutaneum and Rhodotorula mucilaginosa. The procedure uses standard PCR components including DNA from the test species and three primers: two universal external (upstream and downstream) limiting primers and a species-specific internal primer. Species identification requires the formation of a species-specific rDNA nucleotide segment that is significantly smaller (approximately 200 bp) than a non-target segment (approximately 600 bp). The procedure can be used to identify yeasts from single and mixed populations.

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Year:  1995        PMID: 7662289     DOI: 10.1007/bf01573961

Source DB:  PubMed          Journal:  J Ind Microbiol        ISSN: 0169-4146


  5 in total

1.  Contributions to a revision of the genus Trichosporon.

Authors:  E Guého; M T Smith; G S de Hoog; G Billon-Grand; R Christen; W H Batenburg-van der Vegte
Journal:  Antonie Van Leeuwenhoek       Date:  1992-05       Impact factor: 2.271

2.  Partial rRNA sequences in marine yeasts: a model for identification of marine eukaryotes.

Authors:  J W Fell; A Statzell-Tallman; M J Lutz; C P Kurtzman
Journal:  Mol Mar Biol Biotechnol       Date:  1992-06

3.  A compilation of large subunit RNA sequences presented in a structural format.

Authors:  R R Gutell; G E Fox
Journal:  Nucleic Acids Res       Date:  1988       Impact factor: 16.971

4.  Rapid identification of yeast species using three primers in a polymerase chain reaction.

Authors:  J W Fell
Journal:  Mol Mar Biol Biotechnol       Date:  1993-06

5.  Phylogenetic relationships of Cryptococcus neoformans and some related basidiomycetous yeasts determined from partial large subunit rRNA sequences.

Authors:  E Guého; L Improvisi; R Christen; G S de Hoog
Journal:  Antonie Van Leeuwenhoek       Date:  1993-02       Impact factor: 2.271

  5 in total
  6 in total

1.  High-throughput detection of pathogenic yeasts of the genus trichosporon.

Authors:  Mara R Diaz; Jack W Fell
Journal:  J Clin Microbiol       Date:  2004-08       Impact factor: 5.948

2.  Rapid detection of species of the opportunistic yeast Trichosporon by PCR.

Authors:  T Sugita; A Nishikawa; T Shinoda
Journal:  J Clin Microbiol       Date:  1998-05       Impact factor: 5.948

3.  Insights on the genotype distribution among Cryptococcus neoformans and C. gattii Portuguese clinical isolates.

Authors:  A P Maduro; K Mansinho; F Teles; I Silva; W Meyer; M L Martins; J Inácio
Journal:  Curr Microbiol       Date:  2014-02       Impact factor: 2.188

4.  Identification of clinically important ascomycetous yeasts based on nucleotide divergence in the 5' end of the large-subunit (26S) ribosomal DNA gene.

Authors:  C P Kurtzman; C J Robnett
Journal:  J Clin Microbiol       Date:  1997-05       Impact factor: 5.948

5.  Genotypic identification of Fusarium species from ocular sources: comparison to morphologic classification and antifungal sensitivity testing (an AOS thesis).

Authors:  Eduardo C Alfonso
Journal:  Trans Am Ophthalmol Soc       Date:  2008

6.  Development of an oligonucleotide probe for Aureobasidium pullulans based on the small-subunit rRNA gene.

Authors:  S Li; D Cullen; M Hjort; R Spear; J H Andrews
Journal:  Appl Environ Microbiol       Date:  1996-05       Impact factor: 4.792

  6 in total

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