Literature DB >> 7656005

An unusual buried polar cluster in a family of fungal lipases.

U Derewenda1, L Swenson, R Green, Y Wei, G G Dodson, S Yamaguchi, M J Haas, Z S Derewenda.   

Abstract

The stability of globular proteins arises largely from the burial of non-polar amino acids in their interior. These residues are efficiently packed to eliminate energetically unfavorable cavities. Contrary to these observations, high resolution X-ray crystallographic analyses of four homologous lipases from filamentous fungi reveal an alpha/beta fold which contains a buried conserved constellation of charged and polar side chains with associated cavities containing ordered water molecules. It is possible that this structural arrangement plays an important role in interfacial catalysis.

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Year:  1994        PMID: 7656005     DOI: 10.1038/nsb0194-36

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  18 in total

1.  Detergent-induced conformational changes of Humicola lanuginosa lipase studied by fluorescence spectroscopy.

Authors:  A Jutila; K Zhu; S A Patkar; J Vind; A Svendsen; P K Kinnunen
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

2.  Influence of a lipid interface on protein dynamics in a fungal lipase.

Authors:  G H Peters; R P Bywater
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

3.  Conformational changes and orientation of Humicola lanuginosa lipase on a solid hydrophobic surface: an in situ interface Fourier transform infrared-attenuated total reflection study.

Authors:  Sylvie Noinville; Madeleine Revault; Marie-Hélène Baron; Ali Tiss; Stéphane Yapoudjian; Margarita Ivanova; Robert Verger
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

Review 4.  Thermophilic fungi: their physiology and enzymes.

Authors:  R Maheshwari; G Bharadwaj; M K Bhat
Journal:  Microbiol Mol Biol Rev       Date:  2000-09       Impact factor: 11.056

5.  Harvesting the high-hanging fruit: the structure of the YdeN gene product from Bacillus subtilis at 1.8 angstroms resolution.

Authors:  Izabela Janda; Yancho Devedjiev; David Cooper; Maksymilian Chruszcz; Urszula Derewenda; Aleksandra Gabrys; Wladek Minor; Andrzej Joachimiak; Zygmunt S Derewenda
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-05-21

6.  Crystal structure of a secreted lipase from Gibberella zeae reveals a novel "double-lock" mechanism.

Authors:  Zhiyong Lou; Ming Li; Yuna Sun; Ye Liu; Zheng Liu; Wenping Wu; Zihe Rao
Journal:  Protein Cell       Date:  2010-08-28       Impact factor: 14.870

7.  Purification and biochemical characterization of a novel thermostable lipase from Aspergillus niger.

Authors:  V M Namboodiri; R Chattopadhyaya
Journal:  Lipids       Date:  2000-05       Impact factor: 1.880

8.  Effects of i-propanol on the structural dynamics of Thermomyces lanuginosa lipase revealed by tryptophan fluorescence.

Authors:  K Zhu; A Jutila; E K Tuominen; P K Kinnunen
Journal:  Protein Sci       Date:  2001-02       Impact factor: 6.725

9.  The crystal structure of palmitoyl protein thioesterase 1 and the molecular basis of infantile neuronal ceroid lipofuscinosis.

Authors:  J J Bellizzi; J Widom; C Kemp; J Y Lu; A K Das; S L Hofmann; J Clardy
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-25       Impact factor: 11.205

10.  Crystallization and preliminary crystallographic analysis of Gibberella zeae extracellular lipase.

Authors:  Yuna Sun; Ming Li; Yan Zhang; Lifang Liu; Ye Liu; Zheng Liu; Xumei Li; Zhiyong Lou
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-08-20
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