Literature DB >> 7648324

Theory of electrostatic interactions in macromolecules.

M K Gilson1.   

Abstract

In the past year, substantial progress has been made in the modeling of electrostatic interactions in biomolecules. This review highlights advances in the following areas: first, the efficient computation of long-range electrostatic interactions in detailed molecular simulations; second, the application of the Poisson-Boltzmann electrostatic model in conformational analysis; third, the application of the Poisson-Boltzmann model in quantum chemistry calculations; fourth, the development of atomic parameters; and finally, the modeling of ionization equilibria in proteins.

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Year:  1995        PMID: 7648324     DOI: 10.1016/0959-440x(95)80079-4

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  58 in total

1.  Implicit solvent model studies of the interactions of the influenza hemagglutinin fusion peptide with lipid bilayers.

Authors:  D Bechor; N Ben-Tal
Journal:  Biophys J       Date:  2001-02       Impact factor: 4.033

2.  Interactions of the M2delta segment of the acetylcholine receptor with lipid bilayers: a continuum-solvent model study.

Authors:  Amit Kessel; Turkan Haliloglu; Nir Ben-Tal
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

3.  Molecular dynamics simulation of highly charged proteins: comparison of the particle-particle particle-mesh and reaction field methods for the calculation of electrostatic interactions.

Authors:  Raimundo Gargallo; Philippe H Hünenberger; Francesc X Avilés; Baldomero Oliva
Journal:  Protein Sci       Date:  2003-10       Impact factor: 6.725

4.  Influence of the solvent structure on the electrostatic interactions in proteins.

Authors:  Alexander Rubinstein; Simon Sherman
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

5.  Docking flexible ligands in proteins with a solvent exposure- and distance-dependent dielectric function.

Authors:  Daniel P Garden; Boris S Zhorov
Journal:  J Comput Aided Mol Des       Date:  2010-01-30       Impact factor: 3.686

6.  Diarylaniline derivatives as a distinct class of HIV-1 non-nucleoside reverse transcriptase inhibitors.

Authors:  Bingjie Qin; Xingkai Jiang; Hong Lu; Xingtao Tian; Florent Barbault; Li Huang; Keduo Qian; Chin-Ho Chen; Rong Huang; Shibo Jiang; Kuo-Hsiung Lee; Lan Xie
Journal:  J Med Chem       Date:  2010-07-08       Impact factor: 7.446

7.  Computational methods for biomolecular electrostatics.

Authors:  Feng Dong; Brett Olsen; Nathan A Baker
Journal:  Methods Cell Biol       Date:  2008       Impact factor: 1.441

8.  Applications of MMPBSA to Membrane Proteins I: Efficient Numerical Solutions of Periodic Poisson-Boltzmann Equation.

Authors:  Wesley M Botello-Smith; Ray Luo
Journal:  J Chem Inf Model       Date:  2015-10-05       Impact factor: 4.956

9.  A Continuum Poisson-Boltzmann Model for Membrane Channel Proteins.

Authors:  Li Xiao; Jianxiong Diao; D'Artagnan Greene; Junmei Wang; Ray Luo
Journal:  J Chem Theory Comput       Date:  2017-06-14       Impact factor: 6.006

10.  Free diffusion of steroid hormones across biomembranes: a simplex search with implicit solvent model calculations.

Authors:  Idit Oren; Sarel J Fleishman; Amit Kessel; Nir Ben-Tal
Journal:  Biophys J       Date:  2004-08       Impact factor: 4.033

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