Literature DB >> 7638198

Carbohydrate gluing, an architectural mechanism in the supramolecular structure of an annelid giant hemoglobin.

S Ebina1, K Matsubara, K Nagayama, M Yamaki, T Gotoh.   

Abstract

We report a carbohydrate-dependent supramolecular architecture in the extracellular giant hemoglobin (Hb) from the marine worm Perinereis aibuhitensis; we call this architectural mechanism carbohydrate gluing. This study is an extension of our accidental discovery of deterioration in the form of the Hb caused by a high concentration of glucose. The giant Hbs of annelids are natural supramolecules consisting of about 200 polypeptide chains that associate to form a double-layered hexagonal structure. This Hb has 0.5% (wt) carbohydrates, including mannose, xylose, fucose, galactose, glucose, N-acetylglucosamine (GlcNAc), and N-acetylgalactosamine (GalNAc). Using carbohydrate-staining assays, in conjunction with two-dimensional polyacrylamide gel electrophoresis, we found that two types of linker chains (L1 and L2; the nomenclature of the Hb subunits followed that for another marine worm, Tylorrhynchus heterochaetus) contained carbohydrates with both GlcNAc and GalNAc. Furthermore, two types of globins (a and A) have only GlcNAc-containing carbohydrates, whereas the other types of globins (b and B) had no carbohydrates. Monosaccharides including mannose, fucose, glucose, galactose, GlcNAc, and GalNAc reversibly dissociated the intact form of the Hb, but the removal of carbohydrate with N-glycanase resulted in irreversible dissociation. These results show that carbohydrate acts noncovalently to glue together the components to yield the complete quaternary supramolecular structure of the giant Hb. We suggest that this carbohydrate gluing may be mediated through lectin-like carbohydrate-binding by the associated structural chains ("linkers").

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Year:  1995        PMID: 7638198      PMCID: PMC41340          DOI: 10.1073/pnas.92.16.7367

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

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Review 2.  Molecular self-assembly and nanochemistry: a chemical strategy for the synthesis of nanostructures.

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Review 3.  Proteasomes (multicatalytic proteinase complexes) in eukaryotic cells.

Authors:  K Tanaka; A Ichihara
Journal:  Cell Struct Funct       Date:  1990-06       Impact factor: 2.212

4.  Binding of sugar ligands to Ca(2+)-dependent animal lectins. II. Generation of high-affinity galactose binding by site-directed mutagenesis.

Authors:  S T Iobst; K Drickamer
Journal:  J Biol Chem       Date:  1994-06-03       Impact factor: 5.157

5.  Crystals of Lumbricus erythrocruorin.

Authors:  W E Royer; W A Hendrickson; W E Love
Journal:  J Mol Biol       Date:  1987-09-05       Impact factor: 5.469

6.  Quaternary structure of the giant extracellular hemoglobin of the leech Macrobdella decora.

Authors:  O H Kapp; A N Qabar; M C Bonner; M S Stern; D A Walz; M Schmuck; I Pilz; J S Wall; S N Vinogradov
Journal:  J Mol Biol       Date:  1990-05-05       Impact factor: 5.469

7.  The giant extracellular hemoglobin from the polychaete Neanthes diversicolor. The cDNA-derived amino acid sequence of linker chain L2 and the exon/intron boundary conserved in linker genes.

Authors:  T Suzuki; T Ohta; H J Yuasa; T Takagi
Journal:  Biochim Biophys Acta       Date:  1994-04-06

8.  The extracellular hemoglobin of the earthworm, Lumbricus terrestris. Determination of subunit stoichiometry.

Authors:  D W Ownby; H Zhu; K Schneider; R C Beavis; B T Chait; A F Riggs
Journal:  J Biol Chem       Date:  1993-06-25       Impact factor: 5.157

9.  Linker chain L1 of earthworm hemoglobin. Structure of gene and protein: homology with low density lipoprotein receptor.

Authors:  T Suzuki; A F Riggs
Journal:  J Biol Chem       Date:  1993-06-25       Impact factor: 5.157

10.  A novel mannose-specific and sugar specifically aggregatable lectin from the bark of the Japanese pagoda tree (Sophora japonica).

Authors:  M Ueno; H Ogawa; I Matsumoto; N Seno
Journal:  J Biol Chem       Date:  1991-02-15       Impact factor: 5.157

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  3 in total

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2.  Ligand-binding domains in vitellogenin receptors and other LDL-receptor family members share a common ancestral ordering of cysteine-rich repeats.

Authors:  T W Sappington; A S Raikhel
Journal:  J Mol Evol       Date:  1998-04       Impact factor: 2.395

3.  Molecular characterization of hypothetical scaffolding-like protein S1 in multienzyme complex produced by Paenibacillus curdlanolyticus B-6.

Authors:  Patthra Pason; Junjarus Sermsathanaswadi; Rattiya Waeonukul; Chakrit Tachaapaikoon; Sirilak Baramee; Khanok Ratanakhanokchai; Akihiko Kosugi
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  3 in total

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