Literature DB >> 7634098

A short linear peptide that folds into a native stable beta-hairpin in aqueous solution.

F J Blanco1, G Rivas, L Serrano.   

Abstract

The conformational properties of a 16 residue peptide, corresponding to the second beta-hairpin of the B1 domain of protein G, have been studied by nuclear magnetic resonance spectroscopy (NMR). This fragment is monomeric under our experimental conditions and in pure water adopts a population containing up to 40% native-like beta-hairpin structure. The detection by NMR of a native-like beta-hairpin in aqueous solution, reported here for the first time, indicates that these structural elements may have an important role in the early steps of protein folding. It also provides a good model to study in detail the sequence determinants of beta-hairpin structure stability, as has been done with alpha-helices.

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Year:  1994        PMID: 7634098     DOI: 10.1038/nsb0994-584

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  134 in total

1.  Dynamics and thermodynamics of beta-hairpin assembly: insights from various simulation techniques.

Authors:  A Kolinski; B Ilkowski; J Skolnick
Journal:  Biophys J       Date:  1999-12       Impact factor: 4.033

2.  The turn sequence directs beta-strand alignment in designed beta-hairpins.

Authors:  E de Alba; M Rico; M A Jiménez
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

3.  Autonomous folding of a peptide corresponding to the N-terminal beta-hairpin from ubiquitin.

Authors:  R Zerella; P A Evans; J M Ionides; L C Packman; B W Trotter; J P Mackay; D H Williams
Journal:  Protein Sci       Date:  1999-06       Impact factor: 6.725

4.  Structural characterization of a mutant peptide derived from ubiquitin: implications for protein folding.

Authors:  R Zerella; P Y Chen; P A Evans; A Raine; D H Williams
Journal:  Protein Sci       Date:  2000-11       Impact factor: 6.725

5.  Understanding beta-hairpin formation.

Authors:  A R Dinner; T Lazaridis; M Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

6.  Molecular dynamics simulations of unfolding and refolding of a beta-hairpin fragment of protein G.

Authors:  V S Pande; D S Rokhsar
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

7.  A molecular dynamics study of the 41-56 beta-hairpin from B1 domain of protein G.

Authors:  D Roccatano; A Amadei; A Di Nola; H J Berendsen
Journal:  Protein Sci       Date:  1999-10       Impact factor: 6.725

8.  The free energy landscape for beta hairpin folding in explicit water.

Authors:  R Zhou; B J Berne; R Germain
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-18       Impact factor: 11.205

9.  Understanding beta-hairpin formation by molecular dynamics simulations of unfolding.

Authors:  J Lee; S Shin
Journal:  Biophys J       Date:  2001-11       Impact factor: 4.033

10.  Analysis of the factors that stabilize a designed two-stranded antiparallel beta-sheet.

Authors:  Juan F Espinosa; Faisal A Syud; Samuel H Gellman
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

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