Literature DB >> 7624321

Considerations on the folding topology and evolutionary origin of cadherin domains.

L Shapiro1, P D Kwong, A M Fannon, D R Colman, W A Hendrickson.   

Abstract

Cell-cell adhesion in zonula adherens and desmosomal junctions is mediated by cadherins, and recent crystal structures of the first domain from murine N-cadherin provide a plausible molecular basis for this adhesive action. A structure-based sequence analysis of this adhesive domain indicates that its fold is common to all extracellular cadherin domains. The cadherin folding topology is also shown to be similar to immunoglobulin-like domains and to other Greek-key beta-sandwich structures, as diverse as domains from plant cytochromes, bacterial cellulases, and eukaryotic transcription factors. Sequence similarities between cadherins and these other molecules are very low, however, and intron patterns are also different. On balance, independent origins for a favorable folding topology seem more likely than evolutionary divergence from an ancestor common to cadherins and immunoglobulins.

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Year:  1995        PMID: 7624321      PMCID: PMC41415          DOI: 10.1073/pnas.92.15.6793

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Human N-cadherin: nucleotide and deduced amino acid sequence.

Authors:  R A Reid; J J Hemperly
Journal:  Nucleic Acids Res       Date:  1990-10-11       Impact factor: 16.971

2.  Comparison of the hemocyanin beta-barrel with other Greek key beta-barrels: possible importance of the "beta-zipper" in protein structure and folding.

Authors:  B Hazes; W G Hol
Journal:  Proteins       Date:  1992-03

3.  Crystal structure at 2.8 A resolution of a soluble form of the cell adhesion molecule CD2.

Authors:  E Y Jones; S J Davis; A F Williams; K Harlos; D I Stuart
Journal:  Nature       Date:  1992-11-19       Impact factor: 49.962

4.  The fat tumor suppressor gene in Drosophila encodes a novel member of the cadherin gene superfamily.

Authors:  P A Mahoney; U Weber; P Onofrechuk; H Biessmann; P J Bryant; C S Goodman
Journal:  Cell       Date:  1991-11-29       Impact factor: 41.582

Review 5.  Cadherins: a molecular family important in selective cell-cell adhesion.

Authors:  M Takeichi
Journal:  Annu Rev Biochem       Date:  1990       Impact factor: 23.643

6.  Crystal structure of chaperone protein PapD reveals an immunoglobulin fold.

Authors:  A Holmgren; C I Bränden
Journal:  Nature       Date:  1989-11-16       Impact factor: 49.962

7.  Environment and exposure to solvent of protein atoms. Lysozyme and insulin.

Authors:  A Shrake; J A Rupley
Journal:  J Mol Biol       Date:  1973-09-15       Impact factor: 5.469

8.  Structural basis of cell-cell adhesion by cadherins.

Authors:  L Shapiro; A M Fannon; P D Kwong; A Thompson; M S Lehmann; G Grübel; J F Legrand; J Als-Nielsen; D R Colman; W A Hendrickson
Journal:  Nature       Date:  1995-03-23       Impact factor: 49.962

9.  X-ray structure determination of telokin, the C-terminal domain of myosin light chain kinase, at 2.8 A resolution.

Authors:  H M Holden; M Ito; D J Hartshorne; I Rayment
Journal:  J Mol Biol       Date:  1992-10-05       Impact factor: 5.469

10.  Cloning and expression of cDNA encoding a neural calcium-dependent cell adhesion molecule: its identity in the cadherin gene family.

Authors:  K Hatta; A Nose; A Nagafuchi; M Takeichi
Journal:  J Cell Biol       Date:  1988-03       Impact factor: 10.539

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  18 in total

1.  HYR, an extracellular module involved in cellular adhesion and related to the immunoglobulin-like fold.

Authors:  I Callebaut; D Gilgès; I Vigon; J P Mornon
Journal:  Protein Sci       Date:  2000-07       Impact factor: 6.725

2.  Structural similarity to link sequence space: new potential superfamilies and implications for structural genomics.

Authors:  Patrick Aloy; Baldomero Oliva; Enrique Querol; Francesc X Aviles; Robert B Russell
Journal:  Protein Sci       Date:  2002-05       Impact factor: 6.725

3.  Crystal structure of a major secreted protein of Mycobacterium tuberculosis-MPT63 at 1.5-A resolution.

Authors:  Celia W Goulding; Angineh Parseghian; Michael R Sawaya; Duilio Cascio; Marcin I Apostol; Maria Laura Gennaro; David Eisenberg
Journal:  Protein Sci       Date:  2002-12       Impact factor: 6.725

Review 4.  Structure-based models of cadherin-mediated cell adhesion: the evolution continues.

Authors:  A W Koch; K L Manzur; W Shan
Journal:  Cell Mol Life Sci       Date:  2004-08       Impact factor: 9.261

5.  Nanomechanics of the cadherin ectodomain: "canalization" by Ca2+ binding results in a new mechanical element.

Authors:  Javier Oroz; Alejandro Valbuena; Andrés Manuel Vera; Jesús Mendieta; Paulino Gómez-Puertas; Mariano Carrión-Vázquez
Journal:  J Biol Chem       Date:  2010-12-22       Impact factor: 5.157

6.  Cadherins in maternal-foetal interactions: red queen with a green beard?

Authors:  Kyle Summers; Bernard Crespi
Journal:  Proc Biol Sci       Date:  2005-03-22       Impact factor: 5.349

7.  The allosteric role of the Ca2+ switch in adhesion and elasticity of C-cadherin.

Authors:  Marcos Sotomayor; Klaus Schulten
Journal:  Biophys J       Date:  2008-03-07       Impact factor: 4.033

8.  Exon 5 of the RET proto-oncogene: a newly detected risk exon for familial medullary thyroid carcinoma, a novel germ-line mutation Gly321Arg.

Authors:  S Dvorakova; E Vaclavikova; J Duskova; P Vlcek; A Ryska; B Bendlova
Journal:  J Endocrinol Invest       Date:  2005-11       Impact factor: 4.256

Review 9.  Structure and biochemistry of cadherins and catenins.

Authors:  Lawrence Shapiro; William I Weis
Journal:  Cold Spring Harb Perspect Biol       Date:  2009-09       Impact factor: 10.005

Review 10.  Discovery through the computational microscope.

Authors:  Eric H Lee; Jen Hsin; Marcos Sotomayor; Gemma Comellas; Klaus Schulten
Journal:  Structure       Date:  2009-10-14       Impact factor: 5.006

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