Literature DB >> 7615571

Purification and properties of periplasmic 3':5'-cyclic nucleotide phosphodiesterase. A novel zinc-containing enzyme from the marine symbiotic bacterium Vibrio fischeri.

S M Callahan1, N W Cornell, P V Dunlap.   

Abstract

The 3':5'-cyclic nucleotide phosphodiesterase (CNP) of Vibrio fischeri, due to its unusual location in the periplasm, allows this symbiotic bacterium to utilize extracellular 3':5'-cyclic nucleotides (e.g. cAMP) as sole sources of carbon and energy, nitrogen, and phosphorus for growth. The enzyme was purified to apparent homogeneity by a four-step procedure: chloroform shock, ammonium sulfate precipitation, and chromotography on DEAE-Sephacel and Cibacron Blue 3GA-agarose. The active enzyme consists of a single polypeptide with a mass of 34 kDa. At 25 degrees C, it has a pH optimum of 8.25, a Km for cAMP of 73 microns, and a Vmax of 3700 mumol of cAMP hydrolyzed/min/mg protein (turnover number of 1.24 x 10(5)/min). The specific activity of the V. fischeri enzyme is approximately 20-fold greater than that of any previously characterized CNP when comparisons of activity are made at the same assay temperature. Activity increases with temperature up to 60 degrees C. The CNP contains 2 atoms of zinc/monomer, and zinc, copper, magnesium, and calcium can restore activity of the apoenzyme to varying degrees. The exceptional specific activity of the enzyme and its unusual location in the periplasm support proposals that the enzyme enables the bacterium to scavenge 3':5'-cyclic nucleotides in seawater and that the enzyme plays a role in cAMP-mediated host-symbiont interactions.

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Year:  1995        PMID: 7615571     DOI: 10.1074/jbc.270.29.17627

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  10 in total

1.  Characterization of a catalytic ligand bridging metal ions in phosphodiesterases 4 and 5 by molecular dynamics simulations and hybrid quantum mechanical/molecular mechanical calculations.

Authors:  Ying Xiong; Hai-Ting Lu; Yongjian Li; Guang-Fu Yang; Chang-Guo Zhan
Journal:  Biophys J       Date:  2006-09-01       Impact factor: 4.033

2.  Assessing protein-ligand binding modes with computational tools: the case of PDE4B.

Authors:  Gülşah Çifci; Viktorya Aviyente; E Demet Akten; Gerald Monard
Journal:  J Comput Aided Mol Des       Date:  2017-05-22       Impact factor: 3.686

3.  Ecotoxicological study of six drugs in Aliivibrio fischeri, Daphnia magna and Raphidocelis subcapitata.

Authors:  Laura Lomba; David Lapeña; Natalia Ros; Elena Aso; Mariachiara Cannavò; Diego Errazquin; Beatriz Giner
Journal:  Environ Sci Pollut Res Int       Date:  2020-01-11       Impact factor: 4.223

4.  Characterization of the structures of phosphodiesterase 10 binding with adenosine 3',5'-monophosphate and guanosine 3',5'-monophosphate by hybrid quantum mechanical/molecular mechanical calculations.

Authors:  Haiting Lu; Alan C Goren; Chang-Guo Zhan
Journal:  J Phys Chem B       Date:  2010-05-27       Impact factor: 2.991

5.  Enzymatic and mutational analyses of a class II 3',5'-cyclic nucleotide phosphodiesterase, PdeE, from Myxococcus xanthus.

Authors:  Yoshio Kimura; Masaaki Yoshimi; Goro Takata
Journal:  J Bacteriol       Date:  2011-02-11       Impact factor: 3.490

6.  Fundamental reaction pathway and free energy profile for hydrolysis of intracellular second messenger adenosine 3',5'-cyclic monophosphate (cAMP) catalyzed by phosphodiesterase-4.

Authors:  Xi Chen; Xinyun Zhao; Ying Xiong; Junjun Liu; Chang-Guo Zhan
Journal:  J Phys Chem B       Date:  2011-10-05       Impact factor: 2.991

7.  Evolution of self-organisation in Dictyostelia by adaptation of a non-selective phosphodiesterase and a matrix component for regulated cAMP degradation.

Authors:  Yoshinori Kawabe; Karin E Weening; Jacques Marquay-Markiewicz; Pauline Schaap
Journal:  Development       Date:  2012-02-22       Impact factor: 6.868

Review 8.  Rethinking the roles of CRP, cAMP, and sugar-mediated global regulation in the Vibrionaceae.

Authors:  Deanna M Colton; Eric V Stabb
Journal:  Curr Genet       Date:  2015-07-28       Impact factor: 3.886

9.  The EAL domain protein VieA is a cyclic diguanylate phosphodiesterase.

Authors:  Rita Tamayo; Anna D Tischler; Andrew Camilli
Journal:  J Biol Chem       Date:  2005-08-04       Impact factor: 5.157

10.  Role of phosphodiesterase 5 in synaptic plasticity and memory.

Authors:  Daniela Puzzo; Salvatore Sapienza; Ottavio Arancio; Agostino Palmeri
Journal:  Neuropsychiatr Dis Treat       Date:  2008-04       Impact factor: 2.570

  10 in total

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