Literature DB >> 761458

A computer model for hydrodynamic shearing of DNA.

S S Iyengar, S A Quave.   

Abstract

A computer simulation model for the hydrodynamic shearing of DNA is presented. In this model the event space consists of a number of positions at which the DNA strand may break. The results of the model compared with the real world result are reported in this paper. Future endeavors to generalize the model would add significantly to the model's value.

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Year:  1979        PMID： 761458     DOI： 10.1016/0010-468x(79)90029-1

Source DB:  PubMed          Journal:  Comput Programs Biomed        ISSN： 0010-468X


  3 in total

1.  Systematic overrepresentation of DNA termini and underrepresentation of subterminal regions among sequencing templates prepared from hydrodynamically sheared linear DNA molecules.

Authors:  Sherri L Schwartz; Mark L Farman
Journal:  BMC Genomics       Date:  2010-02-02       Impact factor: 3.969

2.  Evaluating characteristics of de novo assembly software on 454 transcriptome data: a simulation approach.

Authors:  Marvin Mundry; Erich Bornberg-Bauer; Michael Sammeth; Philine G D Feulner
Journal:  PLoS One       Date:  2012-02-27       Impact factor: 3.240

3.  Modelling and simulating generic RNA-Seq experiments with the flux simulator.

Authors:  Thasso Griebel; Benedikt Zacher; Paolo Ribeca; Emanuele Raineri; Vincent Lacroix; Roderic Guigó; Michael Sammeth
Journal:  Nucleic Acids Res       Date:  2012-09-07       Impact factor: 16.971
  3 in total

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