Literature DB >> 7607400

Phylogeny of the genus Azospirillum based on 16S rDNA sequence.

R Fani1, C Bandi, M Bazzicalupo, M T Ceccherini, S Fancelli, E Gallori, L Gerace, A Grifoni, N Miclaus, G Damiani.   

Abstract

The 16S rDNA of 17 strains of Azospirillum, 14 assigned to one of the known species A. amazonense, A. brasilense, A. halopraeferens, A. irakense and A. lipoferum, and the other three of uncertain taxonomic position, was sequenced after polymerase chain reaction amplification and analysed in order to investigate the phylogenetic relationships at the intra-generic and super-generic level. The phylogenetic analysis confirms that the genus Azospirillum constitutes a phylogenetically separate entity within the alpha subclass of Proteobacteria and that the five species are well defined. A. brasilense and A. lipoferum are closely related species and form one cluster together with A. halopraeferens; the pair of species A. amazonense and A. irakense forms a second cluster in which Rhodospirillum centenum is also placed.

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Year:  1995        PMID: 7607400     DOI: 10.1111/j.1574-6968.1995.tb07579.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  9 in total

1.  Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA.

Authors:  B M Duineveld; G A Kowalchuk; A Keijzer; J D van Elsas; J A van Veen
Journal:  Appl Environ Microbiol       Date:  2001-01       Impact factor: 4.792

2.  Development and evaluation of a 16S ribosomal DNA array-based approach for describing complex microbial communities in ready-to-eat vegetable salads packed in a modified atmosphere.

Authors:  Knut Rudi; Signe L Flateland; Jon Fredrik Hanssen; Gunnar Bengtsson; Hilde Nissen
Journal:  Appl Environ Microbiol       Date:  2002-03       Impact factor: 4.792

3.  Cyclic GMP controls Rhodospirillum centenum cyst development.

Authors:  Jeremiah N Marden; Qian Dong; Sugata Roychowdhury; James E Berleman; Carl E Bauer
Journal:  Mol Microbiol       Date:  2011-01-09       Impact factor: 3.501

4.  Bacterial diversity and community structure in an aerated lagoon revealed by ribosomal intergenic spacer analyses and 16S ribosomal DNA sequencing.

Authors:  Z Yu; W W Mohn
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

5.  Metabolic flexibility revealed in the genome of the cyst-forming alpha-1 proteobacterium Rhodospirillum centenum.

Authors:  Yih-Kuang Lu; Jeremiah Marden; Mira Han; Wesley D Swingley; Stephen D Mastrian; Sugata Roy Chowdhury; Jicheng Hao; Tamer Helmy; Sun Kim; Ahmet A Kurdoglu; Heather J Matthies; David Rollo; Paul Stothard; Robert E Blankenship; Carl E Bauer; Jeffrey W Touchman
Journal:  BMC Genomics       Date:  2010-05-25       Impact factor: 3.969

6.  DNA-binding properties of a cGMP-binding CRP homologue that controls development of metabolically dormant cysts of Rhodospirillum centenum.

Authors:  Sugata Roychowdhury; Qian Dong; Carl E Bauer
Journal:  Microbiology (Reading)       Date:  2015-09-10       Impact factor: 2.777

7.  Characterization of a novel Spirillum-like bacterium that degrades ferrioxamine-type siderophores.

Authors:  G Winkelmann; K Schmidtkunz; F A Rainey
Journal:  Biometals       Date:  1996-01       Impact factor: 2.949

8.  Genomic insights into the versatility of the plant growth-promoting bacterium Azospirillum amazonense.

Authors:  Fernando H Sant'Anna; Luiz G P Almeida; Ricardo Cecagno; Luciano A Reolon; Franciele M Siqueira; Maicon R S Machado; Ana T R Vasconcelos; Irene S Schrank
Journal:  BMC Genomics       Date:  2011-08-12       Impact factor: 3.969

9.  Transcriptome analysis of Azospirillum brasilense vegetative and cyst states reveals large-scale alterations in metabolic and replicative gene expression.

Authors:  Elizabeth A Malinich; Carl E Bauer
Journal:  Microb Genom       Date:  2018-07-30
  9 in total

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