Literature DB >> 7606789

On base flipping.

R J Roberts1.   

Abstract

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Year:  1995        PMID： 7606789     DOI： 10.1016/0092-8674(95)90046-2

Source DB:  PubMed          Journal:  Cell        ISSN： 0092-8674            Impact factor:   41.582


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  42 in total

1.  Strong minor groove base conservation in sequence logos implies DNA distortion or base flipping during replication and transcription initiation.

Authors:  T D Schneider
Journal:  Nucleic Acids Res       Date:  2001-12-01       Impact factor: 16.971

2.  The P1 phage replication protein RepA contacts an otherwise inaccessible thymine N3 proton by DNA distortion or base flipping.

Authors:  I G Lyakhov; P N Hengen; D Rubens; T D Schneider
Journal:  Nucleic Acids Res       Date:  2001-12-01       Impact factor: 16.971

Review 3.  DNA glycosylases in the base excision repair of DNA.

Authors:  H E Krokan; R Standal; G Slupphaug
Journal:  Biochem J       Date:  1997-07-01       Impact factor: 3.857

4.  Protein-facilitated base flipping in DNA by cytosine-5-methyltransferase.

Authors:  Niu Huang; Nilesh K Banavali; Alexander D MacKerell
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-27       Impact factor: 11.205

Review 5.  Consensus sequence Zen.

Authors:  Thomas D Schneider
Journal:  Appl Bioinformatics       Date:  2002

6.  Asynchronous basepair openings in transcription initiation: CRP enhances the rate-limiting step.

Authors:  Siddhartha Roy; Heon Man Lim; Mofang Liu; Sankar Adhya
Journal:  EMBO J       Date:  2004-02-12       Impact factor: 11.598

7.  Sequence-dependent base pair opening in DNA double helix.

Authors:  Andrew Krueger; Ekaterina Protozanova; Maxim D Frank-Kamenetskii
Journal:  Biophys J       Date:  2006-02-24       Impact factor: 4.033

8.  Conserved patterns in backbone torsional changes allow for single base flipping from duplex DNA with minimal distortion of the double helix.

Authors:  Nilesh K Banavali; Niu Huang; Alexander D MacKerell
Journal:  J Phys Chem B       Date:  2006-06-08       Impact factor: 2.991

9.  NMR imino proton exchange experiments on duplex DNA primarily monitor the opening of purine bases.

Authors:  U Deva Priyakumar; Alexander D Mackerell
Journal:  J Am Chem Soc       Date:  2006-01-25       Impact factor: 15.419

Review 10.  Damage detection and base flipping in direct DNA alkylation repair.

Authors:  Cai-Guang Yang; Kristel Garcia; Chuan He
Journal:  Chembiochem       Date:  2009-02-13       Impact factor: 3.164
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